RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 H3BRB1 525 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ITGA2BP08514 1039 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RTP1P59025 263 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PRKD1Q15139 912 aaPredicted RBP14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PPP1R15BQ5SWA1 713 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CERCAMQ5T4B2 595 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TUT1Q9H6E5 874 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SYNPO2Q9UMS6 1093 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CHADO15335 359 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CILPO75339 1184 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SUPT3HO75486 399 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LMO2P25791 158 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 FKBP1CQ5VVH2 108 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ELMO2Q96JJ3 720 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TUBGCP5Q96RT8 1024 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GMLQ99445 158 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PCYT2Q99447 389 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SERPINI1Q99574 410 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PRPF18Q99633 342 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 Q9H521 79 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TCF7L2Q9NQB0 619 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 C9JVG2 144 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PMM2O15305 246 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NDUFV1P49821 464 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF460Q14592 562 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SLC10A6Q3KNW5 377 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GRIP2Q9C0E4 1043 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CTBP1Q13363 440 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MPP3Q13368 585 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TNFAIP8L3Q5GJ75 292 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ARMCX2Q7L311 632 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 APOBEC3FQ8IUX4 373 aaKnown RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NUP93Q8N1F7 819 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 P2RY11Q96G91 374 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ECSITQ9BQ95 431 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PLEKHA5Q9HAU0 1116 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 FAF1Q9UNN5 650 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CENPFP49454 3210 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 VAPBO95292 243 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PIGNO95427 931 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SERPINE1P05121 402 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MAPK10P53779 464 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PITX1P78337 314 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PACS1Q6VY07 963 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PHTF2Q8N3S3 785 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 HIC2Q96JB3 615 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PANX3Q96QZ0 392 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 OXCT2Q9BYC2 517 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 VANGL2Q9ULK5 521 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TEX264Q9Y6I9 313 aa14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1B-201ENST00000376259 C2CD4BA6NLJ0 364 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MFSD11O43934 449 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SNUPNO95149 360 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 HMBSP08397 361 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 IREB2P48200 963 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PIGZQ86VD9 579 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF483Q8TF39 744 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NRG4Q8WWG1 115 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PABPC5Q96DU9 382 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ILKAPQ9H0C8 392 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NXF3Q9H4D5 531 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STX18Q9P2W9 335 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SNX13Q9Y5W8 968 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SPTLC1O15269 473 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SIN3BO75182 1162 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LYNP07948 512 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MYL3P08590 195 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 HNRNPLP14866 589 aaKnown RBP eCLIP14.74□□□□□ -0.051e-12■■■■■ 38.3
TNFRSF1B-201ENST00000376259 ZFXP17010 805 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MPSTP25325 297 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CSHL1Q14406 222 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DGKDQ16760 1214 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PRAMEF19Q5SWL8 479 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CMASQ8NFW8 434 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DNAJC1Q96KC8 554 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KLHL4Q9C0H6 718 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CCDC167Q9P0B6 97 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KANSL3Q9P2N6 904 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EPS15L1Q9UBC2 864 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RNF103-CHMP3A0A140T963 221 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDK1Q15118 436 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TCEAL1Q15170 157 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STILQ15468 1287 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 FBXO48Q5FWF7 155 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF781Q8N8C0 355 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CSPG4P5Q96PW8 444 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 KCNK16Q96T55 309 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GPR20Q99678 358 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF212Q9UDV6 495 aa14.74□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STX16-NPEPL1H3BU86 382 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TK2O00142 265 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PLSCR1O15162 318 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 RECQL4O94761 1208 aa14.73□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CHRNGP07510 517 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms