RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TDRKHQ9Y2W6 561 aaKnown RBP13.3□□□□□ -0.28
MSH5-204ENST00000375755 TEX264Q9Y6I9 313 aa13.3□□□□□ -0.28
MSH5-204ENST00000375755 TMEM221A6NGB7 291 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 C3orf70A6NLC5 250 aaPredicted RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 H3BSA7 217 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 LYPLA1O75608 230 aaPredicted RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 TRMUO75648 421 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 ATP5BP06576 529 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 NFICP08651 508 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 GNA15P30679 374 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 STX3Q13277 289 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 FAM110CQ1W6H9 321 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 HSP90AA5PQ58FG0 334 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 FAM71DQ8N9W8 422 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 RIN3Q8TB24 985 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 CFAP36Q96G28 342 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 CNBD2Q96M20 576 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 ZIC5Q96T25 663 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 MRPL1Q9BYD6 325 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 SORCS3Q9UPU3 1222 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 UGT1A9O60656 530 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 CST8O60676 142 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 BPGMP07738 259 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 SNRPAP09012 282 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 ITGAXP20702 1163 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 IRX4P78413 519 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 CCDC33Q8N5R6 958 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 UGT1A7Q9HAW7 530 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 UGT1A10Q9HAW8 530 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 UGT1A8Q9HAW9 530 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 XAB2Q9HCS7 855 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 SH3GLB1Q9Y371 365 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 TTLL3Q9Y4R7 772 aa13.29□□□□□ -0.28
MSH5-204ENST00000375755 HEMK1Q9Y5R4 338 aaPredicted RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 MKI67P46013 3256 aaKnown RBP13.29□□□□□ -0.28
MSH5-204ENST00000375755 ITM2AO43736 263 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
MSH5-204ENST00000375755 SIN3BO75182 1162 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 SLC26A2P50443 739 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 COG7P83436 770 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 PPIDQ08752 370 aaKnown RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 KRT81Q14533 505 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 KIZQ2M2Z5 673 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 HOMEZQ8IX15 550 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 LINC01465Q8N7H1 131 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 NLRP7Q8WX94 980 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZNF696Q9H7X3 374 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 BOLA2-SMG1P6H3BVE0 249 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZMPSTE24O75844 475 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 KRT37O76014 449 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 KRT19P08727 400 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 SRGAP2BP0DMP2 458 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ARF4P18085 180 aaPredicted RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 CYP2B6P20813 491 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 L1CAMP32004 1257 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 CDH8P55286 799 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 MTA1Q13330 715 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 APOFQ13790 326 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 GRIK4Q16099 956 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 CNGA3Q16281 694 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 SMTNL2Q2TAL5 461 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 DUSP28Q4G0W2 176 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 AHI1Q8N157 1196 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 PQLC1Q8N2U9 271 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 DNAJC16Q9Y2G8 782 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 CEPT1Q9Y6K0 416 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 TRPM7Q96QT4 1865 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 LOC100653049A0A140TA62 436 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 KRT34O76011 436 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 KLHL2O95198 593 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 MMP8P22894 467 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 GRM1Q13255 1194 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 DPYSL3Q14195 570 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 ZNF484Q5JVG2 852 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 RSPH3Q86UC2 560 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 WDR49Q8IV35 697 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 KIAA0319LQ8IZA0 1049 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 LRRC43Q8N309 656 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 FBXW8Q8N3Y1 598 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 FNDC8Q8TC99 324 aa13.28□□□□□ -0.28
MSH5-204ENST00000375755 GTF3C2Q8WUA4 911 aaPredicted RBP13.28□□□□□ -0.28
MSH5-204ENST00000375755 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms