RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 EDARQ9UNE0 448 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ETV3P41162 512 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CPA2P48052 419 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CDC42P60953 191 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 E2F2Q14209 437 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 PCID2Q5JVF3 399 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 NT5DC1Q5TFE4 455 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RAD54LQ92698 747 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 EHD4Q9H223 541 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 DENND2DQ9H6A0 471 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 UBQLN1Q9UMX0 589 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 DDX3YO15523 660 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 ATMINO43313 823 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 ATP9BO43861 1147 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 METTL18O95568 372 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PDK2Q15119 407 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RBM48Q5RL73 367 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 LRIF1Q5T3J3 769 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SPATA18Q8TC71 538 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ELMO1Q92556 727 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 FAIMQ9NVQ4 179 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PCDHB8Q9UN66 801 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ATP8B3O60423 1300 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ANKDD1BA6NHY2 528 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 BTN3A1O00481 513 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CLDN3O15551 220 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RGS10O43665 173 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 LRRC74AQ0VAA2 488 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PID1Q7Z2X4 250 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 AP1S3Q96PC3 154 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIBADHP31937 336 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 OXCT1P55809 520 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZNF267Q14586 743 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 PRCCQ92733 491 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 CENPNQ96H22 339 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 TMEM216Q9P0N5 145 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 GGA1Q9UJY5 639 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 DNAJC16Q9Y2G8 782 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RHPN2P1A8MT19 583 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 PLOD3O60568 738 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TCEA3O75764 348 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RPL14P50914 215 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 ATP2C1P98194 919 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 KLHDC7AQ5VTJ3 777 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CIAPIN1Q6FI81 312 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 MSANTD1Q6ZTZ1 278 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CMTR1Q8N1G2 835 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 ZNF671Q8TAW3 534 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 UNKLQ9H9P5 680 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 TAS2R7Q9NYW3 318 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 DOLKQ9UPQ8 538 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 C6orf229H3BNL8 230 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PRKCBP05771 671 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 POLD2P49005 469 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RAB4BP61018 213 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 GCKRQ14397 625 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 AGKQ53H12 422 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TIGD4Q8IY51 512 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CFAP206Q8IYR0 622 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 APOL5Q9BWW9 433 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RTFDC1Q9BY42 306 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 C5orf60A6NFR6 353 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 WASLO00401 505 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 MYL12BO14950 172 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 XKR9Q5GH70 373 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 AGR3Q8TD06 166 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PPP3R2Q96LZ3 170 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SETDB2Q96T68 719 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 EXD2Q9NVH0 621 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SUGT1Q9Y2Z0 365 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 STAT3P40763 770 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 GALNT3Q14435 633 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIPK1Q86Z02 1210 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 UBE2J2Q8N2K1 259 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 SVOPLQ8N434 492 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 REEP2Q9BRK0 252 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 I3L521 148 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 KPNA6O60684 536 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CYP21A2P08686 494 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PRKAR1BP31321 381 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 HSD17B4P51659 736 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ACTR3P61158 418 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 ACAP1Q15027 740 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 RBBP7Q16576 425 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 PDPK2PQ6A1A2 396 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TCP10LQ8TDR4 215 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 GAKO14976 1311 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
UBR4-204ENST00000375254 CCNFP41002 786 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms