RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CCDC185Q8N715 623 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 HJURPQ8NCD3 748 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-202ENST00000374676 P2RY11Q96G91 374 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 DESI2Q9BSY9 194 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 SIK2Q9H0K1 926 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 RETREG1Q9H6L5 497 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 FZD10Q9ULW2 581 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 USP18Q9UMW8 372 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 MRPS17Q9Y2R5 130 aaKnown RBP11.75□□□□□ -0.53
HSPG2-202ENST00000374676 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 COL4A3Q01955 1670 aa11.75□□□□□ -0.53
HSPG2-202ENST00000374676 IGLV3-10A0A075B6K4 115 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 KANSL1LA0AUZ9 987 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TMEM221A6NGB7 291 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 DRGXA6NNA5 263 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 M0R296 226 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PRPSAP2O60256 369 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TULP3O75386 442 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PTMAP06454 111 aaKnown RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 CISD3P0C7P0 127 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 HOXD9P28356 352 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 L1CAMP32004 1257 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 SLC6A11P48066 632 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 MESDQ14696 234 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PREPLQ4J6C6 727 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 EFHC2Q5JST6 749 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 ARTNQ5T4W7 220 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TTC39BQ5VTQ0 682 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF683Q8IZ20 524 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF557Q8N988 423 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 FAM3CQ92520 227 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 CD101Q93033 1021 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 MYEOVQ96EZ4 313 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PRICKLE1Q96MT3 831 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PNKPQ96T60 521 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 P2RY13Q9BPV8 354 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 OSBPL6Q9BZF3 934 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 EPHX3Q9H6B9 360 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PLK2Q9NYY3 685 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 DEC1Q9P2X7 70 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
HSPG2-202ENST00000374676 OR12D3Q9UGF7 316 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 PCSK1NQ9UHG2 260 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 KIAA1549LQ6ZVL6 1849 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 NUP205Q92621 2012 aa11.74□□□□□ -0.53
HSPG2-202ENST00000374676 E9PAM4 449 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 TBL1XO60907 577 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 DRD1P21728 446 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 IL1R2P27930 398 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 HTR7P34969 479 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SLC1A1P43005 524 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SGSHP51688 502 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF135P52742 658 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 RPS24P62847 133 aaKnown RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SEMA3BQ13214 749 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 HADHQ16836 314 aaKnown RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 TMEM196Q5HYL7 178 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF662Q6ZS27 426 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 CYP4V2Q6ZWL3 525 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 CHST9Q7L1S5 443 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 C12orf40Q86WS4 652 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 RNF10Q8N5U6 811 aaKnown RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 FIBINQ8TAL6 211 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 IGSF8Q969P0 613 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 RPRD1AQ96P16 312 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 TBC1D17Q9HA65 648 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 LTB4R2Q9NPC1 389 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 DNAJC17Q9NVM6 304 aaKnown RBP11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 AP4E1Q9UPM8 1137 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SLC27A6Q9Y2P4 619 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 SNX10Q9Y5X0 201 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 DUSP10Q9Y6W6 482 aa11.73□□□□□ -0.53
HSPG2-202ENST00000374676 CHD5Q8TDI0 1954 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 A0A1B0GVM2 712 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 TCAF2A6NFQ2 919 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CLDN11O75508 207 aa11.72□□□□□ -0.53
HSPG2-202ENST00000374676 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
HSPG2-202ENST00000374676 CCDC175P0C221 793 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms