RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CLPTM1LQ96KA5 538 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 S100A14Q9HCY8 104 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 IL1RAPL1Q9NZN1 696 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 TPP1O14773 563 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 C6orf222P0C671 652 aaPredicted RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 ZNF286BP0CG31 522 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
PHF1-201ENST00000374512 MX2P20592 715 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 PRDX6P30041 224 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 ARL4AP40617 200 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 GARSP41250 739 aaKnown RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 GRIA1P42261 906 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 ACADSBP45954 432 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 HARS2P49590 506 aaKnown RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 BTKQ06187 659 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 PCLAFQ15004 111 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 CCDC153Q494R4 210 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 CASC4Q6P4E1 433 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 LRRC52Q8N7C0 313 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 ZNF778Q96MU6 729 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 KCTD15Q96SI1 283 aaPredicted RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 TRIM56Q9BRZ2 755 aaKnown RBP18.45■□□□□ 0.54
PHF1-201ENST00000374512 DNAI2Q9GZS0 605 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 VTA1Q9NP79 307 aa18.45■□□□□ 0.54
PHF1-201ENST00000374512 SF3B1O75533 1304 aaKnown RBP eCLIP18.44■□□□□ 0.542e-11■■■■■ 44.6
PHF1-201ENST00000374512 SIN3BO75182 1162 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 PROCP04070 461 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 ITGA2BP08514 1039 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 CCDC130P13994 396 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 PGM2L1Q6PCE3 622 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 DENND5BQ6ZUT9 1274 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 RFX8Q6ZV50 586 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 CCDC33Q8N5R6 958 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 ACTRT2Q8TDY3 377 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 MRPL45Q9BRJ2 306 aaKnown RBP18.44■□□□□ 0.54
PHF1-201ENST00000374512 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 PPP1R12CQ9BZL4 782 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 ADAM28Q9UKQ2 775 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 USP3Q9Y6I4 520 aa18.44■□□□□ 0.54
PHF1-201ENST00000374512 ITM2AO43736 263 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GABBR2O75899 941 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 LYNP07948 512 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GLUD2P49448 558 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 RPL26P61254 145 aaKnown RBP18.43■□□□□ 0.54
PHF1-201ENST00000374512 RPL10AP62906 217 aaKnown RBP18.43■□□□□ 0.54
PHF1-201ENST00000374512 CCNA1P78396 465 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 IRX4P78413 519 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 PDE1BQ01064 536 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 DEUP1Q05D60 604 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 BST2Q10589 180 aaKnown RBP18.43■□□□□ 0.54
PHF1-201ENST00000374512 DCAF4L1Q3SXM0 396 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 ANKRD52Q8NB46 1076 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 COLGALT1Q8NBJ5 622 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 EMID1Q96A84 441 aaPredicted RBP18.43■□□□□ 0.54
PHF1-201ENST00000374512 TTC1Q99614 292 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 TXNDC16Q9P2K2 825 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 SCN1AP35498 2009 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 UPP2O95045 317 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 BAG2O95816 211 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 POLBP06746 335 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GNAT1P11488 350 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 IDH3AP50213 366 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 BCAT1P54687 386 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GRTP1Q5TC63 336 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 RNF220Q5VTB9 566 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 MAMDC4Q6UXC1 1216 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GPRC5AQ8NFJ5 357 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 ARNTL2Q8WYA1 636 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 ISL2Q96A47 359 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 SLC10A4Q96EP9 437 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 GBP5Q96PP8 586 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 CPNE1Q99829 537 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 COPG2Q9UBF2 871 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 SNX9Q9Y5X1 595 aa18.43■□□□□ 0.54
PHF1-201ENST00000374512 PLXNB2O15031 1838 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 ARHGAP42A6NI28 874 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 H3BRB1 525 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 BUD23O43709 281 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 GP5P40197 560 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 ABCE1P61221 599 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 CDC16Q13042 620 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 FRG1Q14331 258 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 ZNF792Q3KQV3 632 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 FSCBQ5H9T9 825 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 SPANXN3Q5MJ09 141 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 CWF19L1Q69YN2 538 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 C16orf46Q6P387 395 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 DHDDSQ86SQ9 333 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 ZNF410Q86VK4 478 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 OR6Y1Q8NGX8 325 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 HSFY1Q96LI6 401 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 SORT1Q99523 831 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 LBHD1Q9BQE6 289 aaPredicted RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 B3GNT5Q9BYG0 378 aa18.42■□□□□ 0.54
PHF1-201ENST00000374512 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
PHF1-201ENST00000374512 FAM49BQ9NUQ9 324 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms