RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 DCLK1O15075 740 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 RFPL1O75677 317 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 KRT37O76014 449 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 SLC18A2Q05940 514 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 OR10T2Q8NGX3 314 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 RNF34Q969K3 372 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 ALKBH8Q96BT7 664 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 LRRC37BQ96QE4 947 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 TSPAN18Q96SJ8 248 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 TKTL2Q9H0I9 626 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 UBP1Q9NZI7 540 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 PCDHA11Q9Y5I1 949 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 VGLL3A8MV65 326 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 FAM155AB1AL88 458 aaPredicted RBP16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 GPR182O15218 404 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 KRT16P08779 473 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 OR4Q2P0C623 313 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 SRGAP2BP0DMP2 458 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 PGFP49763 221 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 PDK1Q15118 436 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 BHLHA9Q7RTU4 235 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 TMEM86AQ8N2M4 240 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 SMARCD1Q96GM5 515 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 FRMD8Q9BZ67 464 aaPredicted RBP16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 SIK2Q9H0K1 926 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 XAB2Q9HCS7 855 aaKnown RBP16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 HAO1Q9UJM8 370 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 CDH9Q9ULB4 789 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 PSAT1Q9Y617 370 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 CBX6O95503 412 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 NQO1P15559 274 aaKnown RBP16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 SERPINB4P48594 390 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 LPIN1Q14693 890 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 OR52K1Q8NGK4 314 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 COLEC11Q9BWP8 271 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 TSSK1BQ9BXA7 367 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 CNGB3Q9NQW8 809 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 KANSL3Q9P2N6 904 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 NOD1Q9Y239 953 aa16.44■□□□□ 0.22
CNKSR1-202ENST00000374253 TSC2P49815 1807 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 CCDC78A2IDD5 438 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ADAMTS4O75173 837 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 SETDB1Q15047 1291 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 NLRP9Q7RTR0 991 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 MTDHQ86UE4 582 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 TAC4Q86UU9 113 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 NDUFAF2Q8N183 169 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ATXN7L3BQ96GX2 97 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 WDCPQ9H6R7 721 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 RCOR3Q9P2K3 495 aaPredicted RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 FAM159BA6NKW6 160 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 SEPT4O43236 478 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 B4GALT3O60512 393 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 STK10O94804 968 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ERVK-10P10266 1014 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ALADP13716 330 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 EPHB2P29323 1055 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ABCG1P45844 678 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 FCGRTP55899 365 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 RAB41Q5JT25 222 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 CES4AQ5XG92 561 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 CD300LGQ6UXG3 332 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 BZW1Q7L1Q6 419 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 USP33Q8TEY7 942 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 ARNTL2Q8WYA1 636 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 TBC1D31Q96DN5 1066 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 PRR11Q96HE9 360 aaPredicted RBP16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 PLCD4Q9BRC7 762 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 VPS11Q9H270 941 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 OR12D3Q9UGF7 316 aa16.43■□□□□ 0.22
CNKSR1-202ENST00000374253 SDR42E2A6NKP2 422 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 FBXO21O94952 628 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 ODC1P11926 461 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 PTPN3P26045 913 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 PCSK1P29120 753 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 FDFT1P37268 417 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 PAFAH1B3Q15102 231 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 SNCBQ16143 134 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 TAF1BQ53T94 588 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 FYB2Q5VWT5 728 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 RWDD4Q6NW29 188 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 GBP7Q8N8V2 638 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 LRRC39Q96DD0 335 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 ZBTB24O43167 697 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 MSI1O43347 362 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 KPNA6O60684 536 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 OPHN1O60890 802 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 LRIG2O94898 1065 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms