RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 PTAR1Q7Z6K3 402 aaPredicted RBP12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 TTC7BQ86TV6 843 aa12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 AGGF1Q8N302 714 aaeCLIP12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 VPS39Q96JC1 886 aa12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
PACSIN1-202ENST00000374043 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ABHD2P08910 425 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 LHX1P48742 406 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 TUBP50607 506 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 GHRHRQ02643 423 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SOX4Q06945 474 aaPredicted RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 MPP3Q13368 585 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ZNF235Q14590 738 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 RABGAP1LQ5R372 815 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 LRRC52Q8N7C0 313 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SCAMP5Q8TAC9 235 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 EBNA1BP2Q99848 306 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 CHADO15335 359 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ZNF792Q3KQV3 632 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 PCED1BQ96HM7 432 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ADA2Q9NZK5 511 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 COL4A5P29400 1685 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SMAPO00193 183 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 CCL22O00626 93 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 BEST1O76090 585 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 RALBP11234 206 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 NME5P56597 212 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 NT5DC4Q86YG4 428 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SPATA22Q8NHS9 363 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 OMDQ99983 421 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ZNF670Q9BS34 389 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 SUDS3Q9H7L9 328 aaPredicted RBP12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
PACSIN1-202ENST00000374043 TM9SF1O15321 606 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CSH1P0DML2 217 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CSH2P0DML3 217 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 MGAT5Q09328 741 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 OLIG1Q8TAK6 271 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 ATP6V1E2Q96A05 226 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 HSFY1Q96LI6 401 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 ARHGEF38Q9NXL2 777 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 A0A096LPK6 155 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TRDMT1O14717 391 aaKnown RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 SOAT2O75908 522 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PDE5AO76074 875 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CPA3P15088 417 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TKTP29401 623 aaKnown RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CLDN10P78369 228 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CTBP1Q13363 440 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 OSTM1Q86WC4 334 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TTC8Q8TAM2 541 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PHF21BQ96EK2 531 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 MFSD3Q96ES6 412 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 B3GALT6Q96L58 329 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TMEM109Q9BVC6 243 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 MAP3K7O43318 606 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 PBX3P40426 434 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 CTXN3Q4LDR2 81 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 SH2D4BQ5SQS7 431 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 FAM171A1Q5VUB5 890 aa12.1□□□□□ -0.47
PACSIN1-202ENST00000374043 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms