RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SENP8Q96LD8 212 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ASAH2Q9NR71 780 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 RAB23Q9ULC3 237 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ZBTB14O43829 449 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 VHLP40337 213 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SNRPD1P62314 119 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 CDK16Q00536 496 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 E2F4Q16254 413 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 PKN1Q16512 942 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 RBM43Q6ZSC3 357 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 PLPPR4Q7Z2D5 763 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 FIBCD1Q8N539 461 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ADAM30Q9UKF2 790 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 GAKO14976 1311 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TCRBV5S4A2TA0A5A2 114 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 STAU1O95793 577 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 AKAP5P24588 427 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 PGS1Q32NB8 556 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 GLT6D1Q7Z4J2 308 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 CASKIN2Q8WXE0 1202 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 EDEM1Q92611 657 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 POP1Q99575 1024 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ZCCHC17Q9NP64 241 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 COMMD8Q9NX08 183 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 GPRC5DQ9NZD1 345 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 KPNA3O00505 521 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 CPSF4O95639 269 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 MMP13P45452 471 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 MRPS35P82673 323 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 C1DQ13901 141 aaKnown RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TCEA2Q15560 299 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 NTRK3Q16288 839 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 VSIG10LQ86VR7 867 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TBL1YQ9BQ87 522 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TMEM121Q9BTD3 319 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC39A8Q9C0K1 460 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 NDUFB5O43674 189 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF23P17027 643 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 DGKAP23743 735 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 IFNGR2P38484 337 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 ADCYAP1R1P41586 468 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TOB1P50616 345 aaPredicted RBP11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 KCNMB4Q86W47 210 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 WNT8BQ93098 351 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 TRPC4Q9UBN4 977 aa11.34□□□□□ -0.59
PHACTR4-202ENST00000373839 RECQL4O94761 1208 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 ASGR1P07306 291 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 UBA1P22314 1058 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CALB2P22676 271 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CES1P23141 567 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 SOX6P35712 828 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 XRCC4Q13426 336 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 VGLL4Q14135 290 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 PHACTR1Q9C0D0 580 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CDC42EP4Q9H3Q1 356 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 PSME2Q9UL46 239 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 TIMM13Q9Y5L4 95 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CCNT2O60583 730 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CNOT3O75175 753 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 SERPINE1P05121 402 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 FGFR1P11362 822 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 KCNA3P22001 575 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 PTENP60484 403 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 FAM45BPQ6NSW5 357 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 LUZP2Q86TE4 346 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 GALNT4Q8N4A0 578 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 ACOX2Q99424 681 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 SMPD4Q9NXE4 827 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 TAGLN3Q9UI15 199 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 DNAJC16Q9Y2G8 782 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 PTCH2Q9Y6C5 1203 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 APOC4-APOC2K7ER74 178 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 ZNF862O60290 1169 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 APOC2P02655 101 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CTSEP14091 401 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 YBX3P16989 372 aaKnown RBP eCLIP11.33□□□□□ -0.64e-7■□□□□ 9.7
PHACTR4-202ENST00000373839 ACAT1P24752 427 aaKnown RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 FAM46CQ5VWP2 391 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 SLC44A2Q8IWA5 706 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 APOL2Q9BQE5 337 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 ARHGAP28Q9P2N2 729 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 ZNF510Q9Y2H8 683 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 OXCT2Q9BYC2 517 aaPredicted RBP11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 NEK6Q9HC98 313 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 SAC3D1A6NKF1 404 aa11.33□□□□□ -0.6
PHACTR4-202ENST00000373839 TRIM13O60858 407 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms