RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SLC2A11Q9BYW1 496 aa20.01■□□□□ 0.79
TRAPPC3-204ENST00000373166 UBXN6Q9BZV1 441 aa20.01■□□□□ 0.79
TRAPPC3-204ENST00000373166 AGO1Q9UL18 857 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-204ENST00000373166 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRAPPC3-204ENST00000373166 GCN1Q92616 2671 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-204ENST00000373166 TNFSF14O43557 240 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 PRKCHP24723 683 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 GRK6P43250 576 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 BST2Q10589 180 aaKnown RBP20■□□□□ 0.79
TRAPPC3-204ENST00000373166 EFEMP1Q12805 493 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 KIF19Q2TAC6 998 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-204ENST00000373166 PIGZQ86VD9 579 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 DENND1CQ8IV53 801 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-204ENST00000373166 RBBP8NLQ8NC74 664 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-204ENST00000373166 OR2T3Q8NH03 318 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 DDI1Q8WTU0 396 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 BBC3Q96PG8 261 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-204ENST00000373166 BTBD3Q9Y2F9 522 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 SNX11Q9Y5W9 270 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 USP3Q9Y6I4 520 aa20■□□□□ 0.79
TRAPPC3-204ENST00000373166 O00370 1275 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 XPO1O14980 1071 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 GBP6Q6ZN66 633 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 MARCH9Q86YJ5 346 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 IRF2BP1Q8IU81 584 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 SCUBE3Q8IX30 993 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 CPXM2Q8N436 756 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 PDCD7Q8N8D1 485 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 SORCS1Q8WY21 1168 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 FAM81BQ96LP2 452 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 CRACR2AQ9BSW2 395 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 OSGEPQ9NPF4 335 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 STRIP2Q9ULQ0 834 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 ANKRD6Q9Y2G4 727 aa19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC3-204ENST00000373166 A0A087WV48 116 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 SETSIPP0DME0 302 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 PDE4CQ08493 712 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 CAMK2BQ13554 666 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 CAMK2GQ13555 558 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 STILQ15468 1287 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 MAN2A1Q16706 1144 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 TRIM65Q6PJ69 517 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 RBM43Q6ZSC3 357 aaKnown RBP19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 RSRC2Q7L4I2 434 aaKnown RBP19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 ENOSF1Q7L5Y1 443 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 ARHGAP18Q8N392 663 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 LHX5Q9H2C1 402 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 C6orf106Q9H6K1 298 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 TM9SF3Q9HD45 589 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 MARCH2Q9P0N8 246 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 CLEC4EQ9ULY5 219 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 PLA2G4CQ9UP65 541 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 APC2O95996 2303 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 PLXNB3Q9ULL4 1909 aa19.98■□□□□ 0.79
TRAPPC3-204ENST00000373166 ACACAQ13085 2346 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 GTPBP10A4D1E9 387 aaKnown RBP19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 KRT5P13647 590 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 ACSL1P33121 698 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 GRIA4P48058 902 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 SMAD1Q15797 465 aaKnown RBP19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 EXOC3L4Q17RC7 722 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 CCDC157Q569K6 752 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 RAB41Q5JT25 222 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 TMEM215Q68D42 235 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 LCLAT1Q6UWP7 414 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 IGSF8Q969P0 613 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 KREMEN1Q96MU8 473 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 LRRC4Q9HBW1 653 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 UBE2TQ9NPD8 197 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 SLCO1B1Q9Y6L6 691 aa19.97■□□□□ 0.79
TRAPPC3-204ENST00000373166 SLC12A8A0AV02 714 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 FAM149AA5PLN7 773 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 E9PAM4 449 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 M0QYV0 167 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 PCDHGA12O60330 932 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 HLA-EP13747 358 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 PRKCSHP14314 528 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 BRD2P25440 801 aaKnown RBP19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 CCT8P50990 548 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 TKTL1P51854 596 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 PTPRNQ16849 979 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 INAVAQ3KP66 663 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 FNDC3BQ53EP0 1204 aaKnown RBP19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 HSP90AA4PQ58FG1 418 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 SASS6Q6UVJ0 657 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 SIX6OS1Q8N1H7 587 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 UBA3Q8TBC4 463 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 TFAP2BQ92481 460 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 BTBD1Q9H0C5 482 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 APEX2Q9UBZ4 518 aa19.96■□□□□ 0.79
TRAPPC3-204ENST00000373166 RNF225M0QZC1 329 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 TULP2O00295 520 aa19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 KCNK3O14649 394 aa19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 SEMA4FO95754 770 aa19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 ZBED1O96006 694 aa19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 SLC9A1P19634 815 aa19.95■□□□□ 0.78
TRAPPC3-204ENST00000373166 ZBTB16Q05516 673 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms