RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 CCT7Q99832 543 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 NDEL1Q9GZM8 345 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 AASDHPPTQ9NRN7 309 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 WHRNQ9P202 907 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 NUDT5Q9UKK9 219 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 PHLPP1O60346 1717 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MYO5BQ9ULV0 1848 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 RGS5O15539 181 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MAFO75444 373 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 IFNA16P05015 189 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 ILDR2Q71H61 639 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 ZNF473Q8WTR7 871 aaKnown RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 DEFB118Q96PH6 123 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 A0A087X0B3 334 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 LOC100653049A0A140TA62 436 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 EVPLLA8MZ36 301 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 SMIM22K7EJ46 135 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 KRT34O76011 436 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 CD52P31358 61 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 S100A5P33763 92 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 CES5AQ6NT32 575 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 ANKRD23Q86SG2 305 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 COL26A1Q96A83 441 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 KLRG1Q96E93 195 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 FAM111AQ96PZ2 611 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 KLHL25Q9H0H3 589 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 POLG2Q9UHN1 485 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 HES2Q9Y543 173 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 TRAV19A0A0A6YYK7 116 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 LRRC14BA6NHZ5 514 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 RBAK-RBAKDNI3L0D1 243 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 PIK3CDO00329 1044 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 TIMM44O43615 452 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 AMD1P17707 334 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 PTPN1P18031 435 aaKnown RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 AMPD1P23109 780 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 HNRNPH2P55795 449 aaKnown RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 FIGNQ5HY92 759 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 NLRP9Q7RTR0 991 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 PLPPR4Q7Z2D5 763 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 TNIP2Q8NFZ5 429 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 FTHL17Q9BXU8 183 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 TKTL2Q9H0I9 626 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 POPDC2Q9HBU9 364 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 KCNMB3Q9NPA1 279 aa10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MED1Q15648 1581 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-202ENST00000372216 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 MEIS2O14770 477 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TOMM70O94826 608 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 HSMCR30P0CW71 290 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CYP2A6P11509 494 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 NDUFV1P49821 464 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TPD52L3Q96J77 140 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 BLOC1S4Q9NUP1 217 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 SNX6Q9UNH7 406 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 USP15Q9Y4E8 981 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CAPN6Q9Y6Q1 641 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CARNS1A5YM72 827 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CFAP73A6NFT4 308 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 GLTPD2A6NH11 291 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 MT-CO1P00395 513 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 HSD17B3P37058 310 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 C21orf59P57076 290 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 RBBP4Q09028 425 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 POU6F1Q14863 301 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TERF2Q15554 542 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 DENND1BQ6P3S1 775 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 NOA1Q8NC60 698 aaKnown RBP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TRPC4APQ8TEL6 797 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 SERPINB12Q96P63 405 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CORO1BQ9BR76 489 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ABCC13Q9NSE7 274 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TBC1D3BA6NDS4 549 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 SPATA31C2B4DYI2 1134 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ELNP15502 786 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TPH1P17752 444 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TFE3P19532 575 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 DNAL1Q4LDG9 190 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CDKAL1Q5VV42 579 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 CYP20A1Q6UW02 462 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 TADA1Q96BN2 335 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ZNF333Q96JL9 665 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 HTATIP2Q9BUP3 242 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 ULBP1Q9BZM6 244 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 MIEF1Q9NQG6 463 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-202ENST00000372216 PEX1O43933 1283 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 SERPINF2P08697 491 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 GCNT1Q02742 428 aa10.01□□□□□ -0.81
COL4A6-202ENST00000372216 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms