RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TTC28Q96AY4 2481 aa16.06■□□□□ 0.16
PRPF38B-202ENST00000370022 TSPAN3O60637 253 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 STARD6P59095 220 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 TPRG1Q6ZUI0 275 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 ETFBKMTQ8IXQ9 262 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 TEKT4Q8WW24 435 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 PRICKLE1Q96MT3 831 aaPredicted RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 RPRD1AQ96P16 312 aaPredicted RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 KCNF1Q9H3M0 494 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 RETREG1Q9H6L5 497 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 TMPRSS4Q9NRS4 437 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 PPARGC1AQ9UBK2 798 aaKnown RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 AP4E1Q9UPM8 1137 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 MRPS17Q9Y2R5 130 aaKnown RBP16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 DUSP10Q9Y6W6 482 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 TICRRQ7Z2Z1 1910 aa16.05■□□□□ 0.16
PRPF38B-202ENST00000370022 IGLV3-10A0A075B6K4 115 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 E9PAM4 449 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 KRT7P08729 469 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 L1CAMP32004 1257 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 HTR7P34969 479 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SOX9P48436 509 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SLC25A11Q02978 314 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TRIM67Q6ZTA4 783 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 POLNQ7Z5Q5 900 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 CCDC117Q8IWD4 279 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SIX5Q8N196 739 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 FAM3CQ92520 227 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 PEBP4Q96S96 227 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SNRNP25Q9BV90 132 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SALL4Q9UJQ4 1053 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 FBXO10Q9UK96 956 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 VANGL2Q9ULK5 521 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 A0A1B0GVM2 712 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 KRBA1A5PL33 1030 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TCAF2A6NFQ2 919 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TMEM110-MUSTN1A8MSY1 372 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 BUB1O43683 1085 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 TBL1XO60907 577 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 SSR1P43307 286 aaKnown RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 LRRC38Q5VT99 294 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 CYP4V2Q6ZWL3 525 aaPredicted RBP16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF683Q8IZ20 524 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 CD101Q93033 1021 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 NELL2Q99435 816 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 EPAS1Q99814 870 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 ZYG11BQ9C0D3 744 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 PLK2Q9NYY3 685 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 DEC1Q9P2X7 70 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 PPP2R2CQ9Y2T4 447 aa16.04■□□□□ 0.16
PRPF38B-202ENST00000370022 ZSCAN12O43309 604 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 TULP3O75386 442 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 CLDN11O75508 207 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 IL1R2P27930 398 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 OPRD1P41143 372 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 SGSHP51688 502 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 CDH4P55283 916 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 RPS24P62847 133 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 IER5LQ5T953 404 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 MANEALQ5VSG8 457 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 DAB2IPQ5VWQ8 1189 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 NUDT18Q6ZVK8 323 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 DAAM2Q86T65 1068 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 SYCE1Q8N0S2 351 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 CFAP52Q8N1V2 620 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 BHMTQ93088 406 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 IGSF8Q969P0 613 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 PNKPQ96T60 521 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 DHX35Q9H5Z1 703 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 SLC27A6Q9Y2P4 619 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 ALG6Q9Y672 507 aa16.03■□□□□ 0.16
PRPF38B-202ENST00000370022 COL4A3Q01955 1670 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 MACROD2A1Z1Q3 448 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 SPOPO43791 374 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 LRIG2O94898 1065 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 RARAP10276 462 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 DRD1P21728 446 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 COMTP21964 271 aa16.02■□□□□ 0.16
PRPF38B-202ENST00000370022 GGCXP38435 758 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms