RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MTA1Q13330 715 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 EIF4EBP2Q13542 120 aaPredicted RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 DHX34Q14147 1143 aaKnown RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 PDK2Q15119 407 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SLC25A52Q3SY17 297 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 ACBD5Q5T8D3 534 aaPredicted RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 FAM183BPQ6ZVS7 135 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SYDE1Q6ZW31 735 aaPredicted RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 RTL10Q7L3V2 364 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 MAATS1Q7Z4T9 603 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 MTERF4Q7Z6M4 381 aaKnown RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 DEPDC4Q8N2C3 294 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 ARFGAP1Q8N6T3 406 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 STKLD1Q8NE28 680 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 OR10T2Q8NGX3 314 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SPPL2BQ8TCT7 592 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 NTAN1Q96AB6 310 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 CLDN23Q96B33 292 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SPATA17Q96L03 361 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 NPY6RQ99463 290 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SMOQ99835 787 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 LPIN3Q9BQK8 851 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 SMG9Q9H0W8 520 aaKnown RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 SEMA4AQ9H3S1 761 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 GOLPH3Q9H4A6 298 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 ANKZF1Q9H8Y5 726 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 LMAN1LQ9HAT1 526 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 LRRC4Q9HBW1 653 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 RBM12Q9NTZ6 932 aaKnown RBP9.13□□□□□ -0.95
SNX27-201ENST00000368838 FAM49BQ9NUQ9 324 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 PIAS3Q9Y6X2 628 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 NCOR2Q9Y618 2525 aa9.13□□□□□ -0.95
SNX27-201ENST00000368838 NUP205Q92621 2012 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 MTMR11A4FU01 709 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 F8VP50 259 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 TNFRSF10BO14763 440 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 ATP2C2O75185 946 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 F9P00740 461 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FGGP02679 453 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 PDGFRAP16234 1089 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 PSMA2P25787 234 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 SDC4P31431 198 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FLT3P36888 993 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 ALDH1A3P47895 512 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 ARSEP51690 589 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 EPHB3P54753 998 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 DAOAP59103 153 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 CYP4F8P98187 520 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 SATB1Q01826 763 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 DMWDQ09019 674 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 SCAPQ12770 1279 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 CBLBQ13191 982 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 SRSF5Q13243 272 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 SIX1Q15475 284 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 CCNG2Q16589 344 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 RSPO4Q2I0M5 234 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 SLC39A12Q504Y0 691 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FAM102AQ5T9C2 384 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 DESI1Q6ICB0 168 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 DGLUCYQ7Z3D6 616 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 DNAJB7Q7Z6W7 309 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 TMC8Q8IU68 726 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 YAF2Q8IY57 180 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 NOA1Q8NC60 698 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 JOSD2Q8TAC2 188 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 GIPC2Q8TF65 315 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 RXFP2Q8WXD0 754 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FAM3CQ92520 227 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 IRF7Q92985 503 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 MYLPFQ96A32 169 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 LRRC3BQ96PB8 259 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 NELL2Q99435 816 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 LRRC3Q9BY71 257 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 OSBPL6Q9BZF3 934 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 TRIM7Q9C029 511 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 POPDC2Q9HBU9 364 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 METTL5Q9NRN9 209 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 ARGLU1Q9NWB6 273 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 MAP10Q9P2G4 905 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 FBXO4Q9UKT5 387 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 STAP1Q9ULZ2 295 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 PACSIN2Q9UNF0 486 aaPredicted RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 SMG5Q9UPR3 1016 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 DRG1Q9Y295 367 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 MRPS17Q9Y2R5 130 aaKnown RBP9.12□□□□□ -0.95
SNX27-201ENST00000368838 CEP192Q8TEP8 1941 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 THADAQ6YHU6 1953 aa9.12□□□□□ -0.95
SNX27-201ENST00000368838 TULP2O00295 520 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 KRIT1O00522 736 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 NCAM2O15394 837 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 PHF2O75151 1096 aa9.11□□□□□ -0.95
SNX27-201ENST00000368838 TJP3O95049 919 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms