RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 SIGLEC11Q96RL6 698 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 MPHOSPH8Q99549 860 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 ANKRD2Q9GZV1 360 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 TCF7L1Q9HCS4 588 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 MYOZ2Q9NPC6 264 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 SAGE1Q9NXZ1 904 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 GGA3Q9NZ52 723 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 STXBP5LQ9Y2K9 1186 aa5.65□□□□□ -1.5
PTPRC-204ENST00000367379 MYO3BQ8WXR4 1341 aa5.65□□□□□ -1.51
PTPRC-204ENST00000367379 CASP8AP2Q9UKL3 1982 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 ABLIM3O94929 683 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 IGKV5-2P06315 115 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 GKP32189 559 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 ARFIP2P53365 341 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 KRT17Q04695 432 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 C4orf46Q504U0 113 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 ATAT1Q5SQI0 421 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 TSPYL6Q8N831 410 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 TSR2Q969E8 191 aaKnown RBP5.64□□□□□ -1.51
PTPRC-204ENST00000367379 CDCA5Q96FF9 252 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 CCDC17Q96LX7 622 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 NUP88Q99567 741 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-204ENST00000367379 CGRRF1Q99675 332 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 C17orf80Q9BSJ5 609 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 COA1Q9GZY4 146 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 HDAC9Q9UKV0 1011 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 MED23Q9ULK4 1368 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 ZNF609O15014 1411 aa5.64□□□□□ -1.51
PTPRC-204ENST00000367379 THSD7BQ9C0I4 1608 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 ANKRD18BA2A2Z9 1011 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 ANP32CO43423 234 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 GCATO75600 419 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 MT-CO3P00414 261 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 THBS3P49746 956 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 GCKRQ14397 625 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 TTLL5Q6EMB2 1281 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 DLK2Q6UY11 383 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 WDR63Q8IWG1 891 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 LINC01465Q8N7H1 131 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 LINS1Q8NG48 757 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 OSR1Q8TAX0 266 aaPredicted RBP5.63□□□□□ -1.51
PTPRC-204ENST00000367379 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 MAP4K1Q92918 833 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 P2RX7Q99572 595 aaKnown RBP5.63□□□□□ -1.51
PTPRC-204ENST00000367379 CPA4Q9UI42 421 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 LUC7L2Q9Y383 392 aaKnown RBP5.63□□□□□ -1.51
PTPRC-204ENST00000367379 ZMYM2Q9UBW7 1377 aa5.63□□□□□ -1.51
PTPRC-204ENST00000367379 AKAP11Q9UKA4 1901 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 CEP290O15078 2479 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 A0A088AWK7 358 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 PRR23D1E9PI22 279 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 MYO1CO00159 1063 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 TLR2O60603 784 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 CNOT3O75175 753 aaKnown RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 PMPCBO75439 489 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 PRR23D2P0DMB1 279 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 RGS19P49795 217 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 LMAN2Q12907 356 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 IFIT5Q13325 482 aaKnown RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 G2E3Q7L622 706 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 ARMC9Q7Z3E5 817 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 APOBEC3FQ8IUX4 373 aaKnown RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 LIX1LQ8IVB5 337 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 BPIFB1Q8TDL5 484 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 MAP3K14Q99558 947 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 TRIM54Q9BYV2 358 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 FOXP1Q9H334 677 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 ARMT1Q9H993 441 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 CNNM1Q9NRU3 951 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 PIH1D1Q9NWS0 290 aaKnown RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 RNF186Q9NXI6 227 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 GAR1Q9NY12 217 aaKnown RBP5.62□□□□□ -1.51
PTPRC-204ENST00000367379 CACNA1FO60840 1977 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 SCN9AQ15858 1988 aa5.62□□□□□ -1.51
PTPRC-204ENST00000367379 CD8B2A6NJW9 211 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 M0R3H8 397 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 ASTN2O75129 1339 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 MYH3P11055 1940 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 APEHP13798 732 aaKnown RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 VCAM1P19320 739 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 SCP2P22307 547 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 TTC3P53804 2025 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 RAB1AP62820 205 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 CFHR1Q03591 330 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 CHRNDQ07001 517 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 SREBF2Q12772 1141 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 DLGAP5Q15398 846 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 PKN2Q16513 984 aaKnown RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 CCDC57Q2TAC2 916 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 PLA1AQ53H76 456 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 KIAA1161Q6NSJ0 714 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 CTU1Q7Z7A3 348 aaKnown RBP5.61□□□□□ -1.51
PTPRC-204ENST00000367379 SLC15A4Q8N697 577 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 TMEM171Q8WVE6 324 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 KBTBD7Q8WVZ9 684 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 CTHRC1Q96CG8 243 aa5.61□□□□□ -1.51
PTPRC-204ENST00000367379 C1GALT1C1Q96EU7 318 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms