RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 COQ4Q9Y3A0 265 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NR2E1Q9Y466 385 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NCANO14594 1321 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DOCK9Q9BZ29 2069 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ABCA7Q8IZY2 2146 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SHROOM3Q8TF72 1996 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KCNJ18B7U540 433 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PES1O00541 588 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PRODHO43272 600 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 EFSO43281 561 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DLX3O60479 287 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 STX10O60499 249 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MOSPD3O75425 235 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TADA3O75528 432 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RNASEH2AO75792 299 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 BEST1O76090 585 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GNA14O95837 355 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 B3GALT4O96024 378 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CALCAP01258 141 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 AFPP02771 609 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 LAMP2P13473 410 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 HMGA1P17096 107 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PTPN2P17706 415 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PTPN1P18031 435 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SLC9A1P19634 815 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ADORA2BP29275 332 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TUFMP49411 452 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RNF144AP50876 292 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CUL2Q13617 745 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KCNJ12Q14500 433 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 VEPH1Q14D04 833 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DHCR24Q15392 516 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TEAD2Q15562 447 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TAF12Q16514 161 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 WDR44Q5JSH3 913 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MIIPQ5JXC2 388 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PRSS36Q5K4E3 855 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 WIPI1Q5MNZ9 446 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CYP4A22Q5TCH4 519 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GJB7Q6PEY0 223 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TRIM65Q6PJ69 517 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TMEM270Q6UE05 265 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PARM1Q6UWI2 310 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TOGARAM2Q6ZUX3 1019 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PAQR9Q6ZVX9 377 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RRAGAQ7L523 313 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 OTOP3Q7RTS5 596 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DNAJB7Q7Z6W7 309 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FAM35AQ86V20 835 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ARHGEF19Q8IW93 802 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 AOPEPQ8N6M6 819 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 LMO3Q8TAP4 145 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SHKBP1Q8TBC3 707 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SLC2A14Q8TDB8 520 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TAF4BQ92750 862 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ACSF2Q96CM8 615 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MCRS1Q96EZ8 462 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ZSWIM3Q96MP5 696 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NT5C1BQ96P26 610 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KXD1Q9BQD3 176 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MED10Q9BTT4 135 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RPP25Q9BUL9 199 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 B3GNT5Q9BYG0 378 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ELOVL4Q9GZR5 314 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 HSD3B7Q9H2F3 369 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 THAP9Q9H5L6 903 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KCNK12Q9HB15 430 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ANO10Q9NW15 660 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TAB2Q9NYJ8 693 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KLHL3Q9UH77 587 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NUMBLQ9Y6R0 609 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NUMA1Q14980 2115 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 PIEZO1Q92508 2521 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 DCXO43602 365 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 NARSO43776 548 aaKnown RBP3.3□□□□□ -1.88
PTPRC-203ENST00000367367 UBOX5O94941 541 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 PRAMEF12O95522 483 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 FGFR1OPO95684 399 aaKnown RBP3.3□□□□□ -1.88
PTPRC-203ENST00000367367 CRTAMO95727 393 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 POU2F2P09086 479 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 PNMA6AP0CW24 399 aaPredicted RBP3.3□□□□□ -1.88
PTPRC-203ENST00000367367 ATP1A3P13637 1013 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 TNFAIP3P21580 790 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 RAD23BP54727 409 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 EPHA5P54756 1037 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 MAP3K7CLP57077 242 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 MYL5Q02045 173 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 SRSF11Q05519 484 aaKnown RBP3.3□□□□□ -1.88
PTPRC-203ENST00000367367 SMARCB1Q12824 385 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 HTR4Q13639 388 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 NCAPHQ15003 741 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 KRT31Q15323 416 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 MAN2A1Q16706 1144 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 TCP11X2Q5H9J9 407 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 C1QTNF12Q5T7M4 302 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 PIK3R6Q5UE93 754 aa3.3□□□□□ -1.88
PTPRC-203ENST00000367367 CDKAL1Q5VV42 579 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms