RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 DUSP28Q4G0W2 176 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ZC3H12AQ5D1E8 599 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 NOMO2Q5JPE7 1267 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 LPPQ93052 612 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 OSGEPL1Q9H4B0 414 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ELOVL6Q9H5J4 265 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 HNRNPRO43390 633 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 IGSF6O95976 241 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 CCNE2O96020 404 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 OCM2P0CE71 109 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 OCMP0CE72 109 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ZNF7P17097 686 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 HLA-DPA1P20036 260 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 CD52P31358 61 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 GRM5P41594 1212 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 MMP13P45452 471 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 DAB2P98082 770 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 SLC45A4Q5BKX6 768 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 CAPRIN2Q6IMN6 1127 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 MTDHQ86UE4 582 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ZCCHC9Q8N567 271 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 PHF21BQ96EK2 531 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 SRPK1Q96SB4 655 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 DTNAQ9Y4J8 743 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 PCDH8O95206 1070 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ARF4P18085 180 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 HALP42357 657 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ERAP2Q6P179 960 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 STN1Q9H668 368 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 NOMO3P69849 1222 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 STARD3Q14849 445 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 RASA2Q15283 850 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 PARP6Q2NL67 630 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 NBPF20Q3BBV1 942 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 OTOAQ7RTW8 1153 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 PHF13Q86YI8 300 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 PPTC7Q8NI37 304 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 LRRC39Q96DD0 335 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ZNF558Q96NG5 402 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 SNRNP25Q9BV90 132 aaKnown RBP16.89■□□□□ 0.29
SCAF8-201ENST00000367178 TAS2R13Q9NYV9 303 aa16.89■□□□□ 0.29
SCAF8-201ENST00000367178 ITGB6P18564 788 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CYLC2Q14093 348 aaPredicted RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 C12orf56Q8IXR9 622 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 TEX9Q8N6V9 391 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 SPATA20Q8TB22 786 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 AENQ8WTP8 325 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 FTHL17Q9BXU8 183 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 POLR1EQ9GZS1 481 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CASZ1Q86V15 1759 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 FGF10O15520 208 aaPredicted RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 MT-CO1P00395 513 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 GLT6D1Q7Z4J2 308 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 PALB2Q86YC2 1186 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 LRRC52Q8N7C0 313 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 HELQQ8TDG4 1101 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 JADE3Q92613 823 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CPNE1Q99829 537 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 TRIM13O60858 407 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 ATP13A4Q4VNC1 1196 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 APOPT1Q96IL0 206 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 MFSD14AQ96MC6 490 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 RNPEPQ9H4A4 650 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CDV3Q9UKY7 258 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 SERPINE1P05121 402 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CRABP2P29373 138 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CCL23P55773 120 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 MARSP56192 900 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CORO7P57737 925 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 BCL2L1Q07817 233 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 CCDC153Q494R4 210 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 GPR20Q99678 358 aa16.88■□□□□ 0.29
SCAF8-201ENST00000367178 COPS7BQ9H9Q2 264 aaPredicted RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 MRPL17Q9NRX2 175 aaKnown RBP16.88■□□□□ 0.29
SCAF8-201ENST00000367178 NCANO14594 1321 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 CARNS1A5YM72 827 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 MSH3P20585 1137 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 PSMA4P25789 261 aaKnown RBP16.87■□□□□ 0.29
SCAF8-201ENST00000367178 GPC1P35052 558 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 IFI35P80217 286 aaPredicted RBP16.87■□□□□ 0.29
SCAF8-201ENST00000367178 CDC16Q13042 620 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 BNC2Q6ZN30 1099 aaPredicted RBP16.87■□□□□ 0.29
SCAF8-201ENST00000367178 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 ETNK2Q9NVF9 386 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 SFMBT1Q9UHJ3 866 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 A0A0A0MRY4 1105 aa16.87■□□□□ 0.29
SCAF8-201ENST00000367178 A0A0U1RQJ8 604 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms