RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
RD3-201ENST00000367002 TBCELQ5QJ74 424 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 CCDC81Q6ZN84 652 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 OR52K1Q8NGK4 314 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 OR6Y1Q8NGX8 325 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 JOSD2Q8TAC2 188 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 COPS5Q92905 334 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 EXOSC4Q9NPD3 245 aaKnown RBP11.73□□□□□ -0.53
RD3-201ENST00000367002 CROTQ9UKG9 612 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 GPR182O15218 404 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 CCNE2O96020 404 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 RENBPP51606 427 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 NUP107P57740 925 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 ZC3H12AQ5D1E8 599 aaKnown RBP11.73□□□□□ -0.53
RD3-201ENST00000367002 SNX31Q8N9S9 440 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 ULBP1Q9BZM6 244 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 VTI1BQ9UEU0 232 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 TNFSF13BQ9Y275 285 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 HES2Q9Y543 173 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 MROH7Q68CQ1 1323 aa11.73□□□□□ -0.53
RD3-201ENST00000367002 SLC12A8A0AV02 714 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 F5H5T6 163 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 DPYSL4O14531 572 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SMNDC1O75940 238 aaKnown RBP eCLIP11.72□□□□□ -0.53
RD3-201ENST00000367002 HOXD10P28358 340 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 NEK2P51955 445 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 JAM2P57087 298 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 TTLL9Q3SXZ7 439 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FAM117BQ6P1L5 589 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 RIPOR1Q6ZS17 1223 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FAM183BPQ6ZVS7 135 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ACO2Q99798 780 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 TEX12Q9BXU0 123 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 XPNPEP3Q9NQH7 507 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 RRN3Q9NYV6 651 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SORCS3Q9UPU3 1222 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 MRC1P22897 1456 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 MRASO14807 208 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 INPP4BO15327 924 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PRPF4O43172 522 aaKnown RBP eCLIP11.72□□□□□ -0.53
RD3-201ENST00000367002 PLA2G6O60733 806 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ASMTLO95671 621 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SKIV2L2P42285 1042 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 DGKZQ13574 1117 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FASTKQ14296 549 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 SLC22A9Q8IVM8 553 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ZNF556Q9HAH1 456 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PTPRHQ9HD43 1115 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SLC17A7Q9P2U7 560 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PAIP2BQ9ULR5 123 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 NOS2P35228 1153 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 TUBP50607 506 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SCNN1BP51168 640 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ZC3H12BQ5HYM0 836 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 OTUD3Q5T2D3 398 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 OVOS1Q6IE37 1185 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PLEKHA7Q6IQ23 1121 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 UGT3A1Q6NUS8 523 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 WNT8BQ93098 351 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 CERS2Q96G23 380 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 SEPHS2Q99611 448 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 LRMDAQ9H2I8 198 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 EIF3LQ9Y262 564 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 ADGRA3Q8IWK6 1321 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 CXCL11O14625 94 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 POMCP01189 267 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 LTFP02788 710 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 FASP25445 335 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 S100A5P33763 92 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 RIN3Q8TB24 985 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 VAT1Q99536 393 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 MECRQ9BV79 373 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 RNPEPQ9H4A4 650 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 COPS7BQ9H9Q2 264 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 POPDC2Q9HBU9 364 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
RD3-201ENST00000367002 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
RD3-201ENST00000367002 C5orf58C9J3I9 102 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms