RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PAGE2BQ5JRK9 111 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TAF2Q6P1X5 1199 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TTC27Q6P3X3 843 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 EBF2Q9HAK2 575 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDC42BPAQ5VT25 1732 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 UCHL3P15374 230 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF438Q7Z4V0 828 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ELMOD2Q8IZ81 293 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 POLE4Q9NR33 117 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ERAP1Q9NZ08 941 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDC40O60508 579 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 PIK3R1P27986 724 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 GREM2Q9H772 168 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 I3L521 148 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 RRM2P31350 389 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TOMM20Q15388 145 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 EXOC3L1Q86VI1 746 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 S100A14Q9HCY8 104 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 A0A1W2PQJ5 194 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 AP3D1O14617 1153 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 MAPK9P45984 424 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 NUMBP49757 651 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 NRG3P56975 720 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC20A1Q8WUM9 679 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 NACC2Q96BF6 587 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 PDCD10Q9BUL8 212 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 OSBPL7Q9BZF2 842 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TCF7L2Q9NQB0 619 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRPC4Q9UBN4 977 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 PTPN7P35236 360 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ACLYP53396 1101 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 OR2B6P58173 313 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 POU4F1Q01851 419 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TP53BP1Q12888 1972 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TM9SF1O15321 606 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 VAPBO95292 243 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 OLR1P78380 273 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 MZT2BQ6NZ67 158 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 FAM47BQ8NA70 645 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ACTRT1Q8TDG2 376 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TIPINQ9BVW5 301 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ASXL2Q76L83 1435 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 IL18R1Q13478 541 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 KRT74Q7RTS7 529 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RCOR2Q8IZ40 523 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RSPH9Q9H1X1 276 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 NRP2O60462 931 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 FADS2O95864 444 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ERVK-10P10266 1014 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MIIPQ5JXC2 388 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 NIPAL1Q6NVV3 410 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC13A5Q86YT5 568 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF333Q96JL9 665 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MMP19Q99542 508 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 BRD7Q9NPI1 651 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 GH2P01242 217 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PTENP60484 403 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 STX4Q12846 297 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PKN2Q16513 984 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 FRMD7Q6ZUT3 714 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 XDHP47989 1333 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 RARGP13631 454 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 TAF13Q15543 124 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 PPIL6Q8IXY8 311 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MOSPD2Q8NHP6 518 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 MAGEE2Q8TD90 523 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 H3BNX3 289 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 DHRSXQ8N5I4 330 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 WDR41Q9HAD4 459 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
CDC42BPA-205ENST00000366769 WWOXQ9NZC7 414 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms