RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
CDC42BPA-202ENST00000366764 MICAL2O94851 1124 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 LDLRP01130 860 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CPT1AP50416 773 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 NOMO3P69849 1222 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 ATP6V0D2Q8N8Y2 350 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 RGSL1A5PLK6 1076 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SNAP91O60641 907 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SKAP2O75563 359 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TRUB2O95900 331 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 ANPEPP15144 967 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 PPATQ06203 517 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 FASTKQ14296 549 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SLC44A1Q8WWI5 657 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TSC22D4Q9Y3Q8 395 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 AXLP30530 894 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CHRNA5P30532 468 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CCDC60Q8IWA6 550 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 RP9Q8TA86 221 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DNAJB4Q9UDY4 337 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 PLLPQ9Y342 182 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CYP1A1P04798 512 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DPYSQ14117 519 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TTC30AQ86WT1 665 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 FAM13CQ8NE31 585 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 WDR41Q9HAD4 459 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DDX28Q9NUL7 540 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SNTNA6NMZ2 147 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 C5orf58C9J3I9 102 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CSE1LP55060 971 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CRY2Q49AN0 593 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 TCHHL1Q5QJ38 904 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 MRPL57Q9BQC6 102 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 IMPAD1Q9NX62 359 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 KPNA4O00629 521 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SQLEQ14534 574 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 LRRC71Q8N4P6 559 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 KCTD14Q9BQ13 255 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 OLA1Q9NTK5 396 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 RHBDL2Q9NX52 303 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 EVPLQ92817 2033 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DNM1LO00429 736 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 HDAC3O15379 428 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 GLRA4Q5JXX5 417 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 SNX32Q86XE0 403 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 DGCR14Q96DF8 476 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 IARS2Q9NSE4 1012 aaKnown RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 FGF10O15520 208 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 RHOBTB1O94844 696 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 CHST12Q9NRB3 414 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 ATAD3AQ9NVI7 634 aa12.06□□□□□ -0.48
CDC42BPA-202ENST00000366764 QPCTQ16769 361 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 LRRC49Q8IUZ0 686 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 MUC13Q9H3R2 512 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 RSL24D1Q9UHA3 163 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 A0A1B0GW55 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 CBFA2T3O75081 653 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L2P0CJ85 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L3P0CJ86 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L4P0CJ87 422 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L5P0CJ88 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L6P0CJ89 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4L7P0CJ90 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 CXCL8P10145 99 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ARPP19P56211 112 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 KAT5Q92993 513 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 HSFY1Q96LI6 401 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TM7SF2O76062 418 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 DLG4P78352 724 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PTRHD1Q6GMV3 140 aaKnown RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 SYBUQ9NX95 663 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PRDX6P30041 224 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ALDH1A3P47895 512 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PCSK7Q16549 785 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ANKS1BQ7Z6G8 1248 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TSPAN14Q8NG11 270 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 USP6NLQ92738 828 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 ITGB4P16144 1822 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 NR5A2O00482 541 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 CRHR1P34998 444 aa12.05□□□□□ -0.48
CDC42BPA-202ENST00000366764 PTPN7P35236 360 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms