RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 KCNC3Q14003 757 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 KRT32Q14532 448 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 PTPN21Q16825 1174 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LSM12Q3MHD2 195 aaKnown RBP5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LONRF3Q496Y0 759 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 C19orf54Q5BKX5 351 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 CLLU1OSQ5K130 101 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 EGFLAMQ63HQ2 1017 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 NAIF1Q69YI7 327 aaPredicted RBP5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 DOK3Q7L591 496 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 ELOA2Q8IYF1 753 aaPredicted RBP5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LRRC43Q8N309 656 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LINC01465Q8N7H1 131 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 GLB1L3Q8NCI6 653 aaPredicted RBP5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 SLC16A11Q8NCK7 471 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 CCDC12Q8WUD4 166 aaPredicted RBP5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 ZNF480Q8WV37 535 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 AUTS2Q8WXX7 1259 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LENG9Q96B70 501 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 FAM167AQ96KS9 214 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 SH2D3AQ9BRG2 576 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 SLC26A6Q9BXS9 759 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 S1PR5Q9H228 398 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 SPG21Q9NZD8 308 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 VPS54Q9P1Q0 977 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 CEP72Q9P209 647 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 MCM8Q9UJA3 840 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 CLCA2Q9UQC9 943 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 LZTS1Q9Y250 596 aa5.78□□□□□ -1.48
RNU4-4P-201ENST00000364588 FSD2A1L4K1 749 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 NPIPB8E9PQR5 432 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 GPR39O43194 453 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 AKAP8O43823 692 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 PHF2O75151 1096 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 ZC3H11AO75152 810 aaKnown RBP eCLIP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 HMGB1P09429 215 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 DARSP14868 501 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 AVPR2P30518 371 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 CIITAP33076 1130 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 PPM1AP35813 382 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 CASRP41180 1078 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 NLRP5P59047 1200 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 CCT2P78371 535 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 SMC1AQ14683 1233 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 RARS2Q5T160 578 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 LRCH2Q5VUJ6 765 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 RNF219Q5W0B1 726 aaPredicted RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 BLOC1S2Q6QNY1 142 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 TMEM184AQ6ZMB5 413 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 FAM43BQ6ZT52 329 aaPredicted RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 TMEM173Q86WV6 379 aaPredicted RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 SLC39A11Q8N1S5 342 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 C12orf76Q8N812 135 aaPredicted RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 MRPL43Q8N983 215 aaKnown RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 BICD2Q8TD16 824 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 ZNF483Q8TF39 744 aaPredicted RBP5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 SNX33Q8WV41 574 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 CASP10Q92851 521 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 CCDC136Q96JN2 1154 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 TEKT3Q9BXF9 490 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 UNC45AQ9H3U1 944 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 SMOC2Q9H3U7 446 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 POMKQ9H5K3 350 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 NRBP2Q9NSY0 501 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 DPP7Q9UHL4 492 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 SNX14Q9Y5W7 946 aa5.77□□□□□ -1.49
RNU4-4P-201ENST00000364588 A0A087WZ62 844 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 A0A0U1RQF3 1178 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 B5MCH6 92 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 C2CD4DB7Z1M9 353 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 HOXA3O43365 443 aaPredicted RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 STC2O76061 302 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 TDP2O95551 362 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 CXCL14O95715 111 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 GASTP01350 101 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 EPCAMP16422 314 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 HOXB8P17481 243 aaPredicted RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 RPS6KB1P23443 525 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 SFNP31947 248 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 ACVRL1P37023 503 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 ALDH7A1P49419 539 aaKnown RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 JAK3P52333 1124 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 MRPL49Q13405 166 aaKnown RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 FAM214AQ32MH5 1076 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 PLA2G4FQ68DD2 849 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 TWF2Q6IBS0 349 aaKnown RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 CES5AQ6NT32 575 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 FAM180AQ6UWF9 173 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 MIER3Q7Z3K6 550 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 VPS52Q8N1B4 723 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 CCDC148Q8NFR7 591 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 ATL2Q8NHH9 583 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 TBCKQ8TEA7 893 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 ATOH1Q92858 354 aaPredicted RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 AHCYL2Q96HN2 611 aaKnown RBP5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 NLRP4Q96MN2 994 aa5.76□□□□□ -1.49
RNU4-4P-201ENST00000364588 RIT2Q99578 217 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms