RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 NRF1Q16656 503 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 BNC2Q6ZN30 1099 aaPredicted RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 OTOP3Q7RTS5 596 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 DSG4Q86SJ6 1040 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 NUDCD3Q8IVD9 361 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 FAM109AQ8N4B1 249 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 PIWIL2Q8TC59 973 aaKnown RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 GIMAP5Q96F15 307 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 EBF4Q9BQW3 602 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 GON7Q9BXV9 100 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 ZNF717Q9BY31 904 aaPredicted RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 SLC13A1Q9BZW2 595 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 NDFIP2Q9NV92 336 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 COPG2Q9UBF2 871 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 KLQ9UEF7 1012 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 XPO7Q9UIA9 1087 aaKnown RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 CLUHO75153 1309 aa11.88□□□□□ -0.51
CNOT4-203ENST00000361528 MARF1Q9Y4F3 1742 aaKnown RBP11.88□□□□□ -0.51
CNOT4-203ENST00000361528 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 GARTP22102 1010 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 CASP3P42574 277 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 NKX2-5P52952 324 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 NME3Q13232 169 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 PIGGQ5H8A4 983 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 UBE2UQ5VVX9 321 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 UNC5AQ6ZN44 842 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 LCORLQ8N3X6 602 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 MFSD2AQ8NA29 543 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.513e-6■■■■□ 20.4
CNOT4-203ENST00000361528 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 GIMAP4Q9NUV9 329 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 KDM3AQ9Y4C1 1321 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 AKAP3O75969 853 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 SEC14L2O76054 403 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 SEC24DO94855 1032 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 GSNP06396 782 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 CAPN1P07384 714 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 KITP10721 976 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 NLRP11P59045 1033 aaKnown RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 PRKCEQ02156 737 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 CALCRLQ16602 461 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 HIF1AQ16665 826 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 HYIQ5T013 277 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 PDPK2PQ6A1A2 396 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 MAMDC4Q6UXC1 1216 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 CTAGE3PQ8IX95 158 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 BHLHE22Q8NFJ8 381 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 TOP1MTQ969P6 601 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 MAGED4Q96JG8 741 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 SERAC1Q96JX3 654 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 UHRF1Q96T88 793 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 FGFBP2Q9BYJ0 223 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 ATP13A3Q9H7F0 1226 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 C8orf4Q9NR00 106 aa11.87□□□□□ -0.51
CNOT4-203ENST00000361528 MN1Q10571 1320 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-203ENST00000361528 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 RNASEH2AO75792 299 aaKnown RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 TOMM70O94826 608 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 C7P10643 843 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 IMPDH1P20839 514 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 GLRA2P23416 452 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 PHKA1P46020 1223 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 NT5C2P49902 561 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 NME5P56597 212 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 SRP54P61011 504 aaKnown RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 VAC14Q08AM6 782 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 BST2Q10589 180 aaKnown RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 TRIM32Q13049 653 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 C5orf22Q49AR2 442 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 TEDDM1Q5T9Z0 273 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 KCTD8Q6ZWB6 473 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 SLC22A16Q86VW1 577 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 SLC2A14Q8TDB8 520 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 CD320Q9NPF0 282 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 FBXO8Q9NRD0 319 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 ZNF221Q9UK13 617 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 CAB39Q9Y376 341 aaPredicted RBP11.86□□□□□ -0.51
CNOT4-203ENST00000361528 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
CNOT4-203ENST00000361528 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms