RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CNTNAP4Q9C0A0 1308 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 BNIP3LO60238 219 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 LZTS3O60299 673 aaPredicted RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 NFIL3Q16649 462 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 CACHD1Q5VU97 1274 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 SATL1Q86VE3 508 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 MIER2Q8N344 545 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 FAM151AQ8WW52 585 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 CEP41Q9BYV8 373 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 SSU72Q9NP77 194 aaKnown RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 CDH22Q9UJ99 828 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 TGFB1I1O43294 461 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 VCLP18206 1134 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMC5-201ENST00000361138 LUZP2Q86TE4 346 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 TTLL6Q8N841 843 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 RORBQ92753 470 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 COQ7Q99807 217 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 MT-CO1P00395 513 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 RAD23AP54725 363 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 DPYSQ14117 519 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 SGO1Q5FBB7 561 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 TRIM63Q969Q1 353 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 NCF1BA6NI72 391 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 NCF1CA8MVU1 366 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 ERVK-10P10266 1014 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 NCF1P14598 390 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 CDH3P22223 829 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 ACMSDQ8TDX5 336 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 REXO4Q9GZR2 422 aaKnown RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 PXMP2Q9NR77 195 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 PSMD13Q9UNM6 376 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 SQLEQ14534 574 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 ZDHHC24Q6UX98 284 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 CCDC80Q76M96 950 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 TMEM161AQ9NX61 479 aa14.26□□□□□ -0.13
SMC5-201ENST00000361138 NKX1-2Q9UD57 310 aaPredicted RBP14.26□□□□□ -0.13
SMC5-201ENST00000361138 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 EME2A4GXA9 379 aaPredicted RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 GOLGA8TH3BQL2 631 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 NPY2RP49146 381 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 PSME3P61289 254 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 GPR107Q5VW38 600 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SNX31Q8N9S9 440 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 PHF21BQ96EK2 531 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 RNF145Q96MT1 663 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 EURLQ9NYK6 297 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 MPP6Q9NZW5 540 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SIGLEC16A6NMB1 481 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 IL1R1P14778 569 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 NFIAQ12857 509 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 FRG1Q14331 258 aaKnown RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 AMHR2Q16671 573 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TMEM26Q6ZUK4 368 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 EID3Q8N140 333 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CDH19Q9H159 772 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 ADAM28Q9UKQ2 775 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 A0A087X1B8 175 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 VAPBO95292 243 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SPATA31C1P0DKV0 1188 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 HK2P52789 917 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TAF5Q15542 800 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 VSTM1Q6UX27 236 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SPATA2LQ8IUW3 424 aaPredicted RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 C10orf107Q8IVU9 208 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.25□□□□□ -0.13
SMC5-201ENST00000361138 ADCY4Q8NFM4 1077 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 FIG4Q92562 907 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 C7orf26Q96N11 449 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 RMND5AQ9H871 391 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 SPAG4Q9NPE6 437 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 KCNQ5Q9NR82 932 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TJP2Q9UDY2 1190 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CIDEBQ9UHD4 219 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TNS2Q63HR2 1409 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 C3P01024 1663 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CAPN8A6NHC0 703 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CCDC154A6NI56 674 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 TBKBP1A7MCY6 615 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 PEX11AO75192 247 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 BPGMP07738 259 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 CCT8P50990 548 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 GTF2BQ00403 316 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 BROXQ5VW32 411 aa14.25□□□□□ -0.13
SMC5-201ENST00000361138 FAM131BQ86XD5 332 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms