RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RPRD1AQ96P16 312 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ASB2Q96Q27 587 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 H3BN98 237 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 GRAP2O75791 330 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 SNX4O95219 450 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 PRKAR1AP10644 381 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 MRPS22P82650 360 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 SYN2Q92777 582 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 BORCS5Q969J3 196 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM120BQ96EK7 910 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 MLXQ9UH92 298 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CYP2A7P20853 494 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ME2P23368 584 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 IL2P60568 153 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 NDNQ99608 321 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 IRAK3Q9Y616 596 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 KHDRBS3O75525 346 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 GEMP55040 296 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 PDK2Q15119 407 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 AGMOQ6ZNB7 445 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 PROX1Q92786 737 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CAPN10Q9HC96 672 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 PSME2Q9UL46 239 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 KPNA5O15131 536 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CPSF4O95639 269 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 ITGALP20701 1170 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 RPL5P46777 297 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 POU5F1Q01860 360 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC185Q8N715 623 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 EZH1Q92800 747 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 UBE2E3Q969T4 207 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 GPRASP2Q96D09 838 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 TBX3O15119 743 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 AP3S1Q92572 193 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF37AP17032 561 aaPredicted RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 GTF2H1P32780 548 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC26A3P40879 764 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 RGS7P49802 495 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 COPZ1P61923 177 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SCRN3Q0VDG4 424 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CHST12Q9NRB3 414 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CROTQ9UKG9 612 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 QRICH2Q9H0J4 1663 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 BCLAF3A2AJT9 711 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 FBXO21O94952 628 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 OR6A2O95222 327 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 RHAGQ02094 409 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 AADATQ8N5Z0 425 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 POU5F2Q8N7G0 328 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 DGCR14Q96DF8 476 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 TMCC2O75069 709 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 NCAM1P13591 858 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 PDX1P52945 283 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 PPIL2Q13356 520 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 GRM4Q14833 912 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 TRPV3Q8NET8 790 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SPATA5L1Q9BVQ7 753 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CMTM6Q9NX76 183 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 RPL3P39023 403 aaKnown RBP13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 CBX5P45973 191 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 BIKQ13323 160 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 PJA1Q8NG27 643 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF221Q9UK13 617 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
SRGAP3-201ENST00000360413 VAV1P15498 845 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 LSM3P62310 102 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 EFR3AQ14156 821 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TUBA3EQ6PEY2 450 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CHPFQ8IZ52 775 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 DLG3Q92796 817 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 Q96MT0 163 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TMEM8AQ9HCN3 771 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 MGAT4AQ9UM21 535 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 HAT1O14929 419 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms