RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FAM83CQ9BQN1 747 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SIK2Q9H0K1 926 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 LINC00597Q9H2U6 94 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 DHX35Q9H5Z1 703 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 THG1LQ9NWX6 298 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 OR12D3Q9UGF7 316 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 PRKAG3Q9UGI9 489 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 LIMD1Q9UGP4 676 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 PACSIN2Q9UNF0 486 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 FAM72CH0Y354 149 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 TACR2P21452 398 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 KDELR1P24390 212 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 CHKAP35790 457 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 MARCKSL1P49006 195 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 ETF1P62495 437 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 PDK2Q15119 407 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 RPS6KA1Q15418 735 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 FAM72AQ5TYM5 149 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 MANEALQ5VSG8 457 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 RAP1GAP2Q684P5 730 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 FAM72DQ6L9T8 149 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 FBXL22Q6P050 247 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 FAM72BQ86X60 149 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 RAPGEF5Q92565 580 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 HSPH1Q92598 858 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 WDR24Q96S15 920 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 KCTD15Q96SI1 283 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 PCDH18Q9HCL0 1135 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 DUS2Q9NX74 493 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 WNT6Q9Y6F9 365 aa12.82□□□□□ -0.36
NIF3L1-201ENST00000359683 IGLV3-10A0A075B6K4 115 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 C3orf70A6NLC5 250 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 DRGXA6NNA5 263 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 CHADO15335 359 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 LRIG2O94898 1065 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 IL4RP24394 825 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 GJC1P36383 396 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 GGCXP38435 758 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 HCAR3P49019 387 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 CDH6P55285 790 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 RWDD2BP57060 319 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 EML3Q32P44 896 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 VSIG1Q86XK7 387 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 ADHFE1Q8IWW8 467 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 UBL4BQ8N7F7 174 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 KCTD6Q8NC69 237 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 RSAD2Q8WXG1 361 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 TSC1Q92574 1164 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 ALG3Q92685 438 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 TRMT61BQ9BVS5 477 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 KCNK12Q9HB15 430 aa12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 PPARGC1AQ9UBK2 798 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-201ENST00000359683 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ZNF487B1APH4 448 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 E9PAM4 449 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 F5H5T6 163 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ENC1O14682 589 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 DCXO43602 365 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ALADP13716 330 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 HTR7P34969 479 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 IFNAR2P48551 515 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 PDGFRLQ15198 375 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 TAZQ16635 292 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 RFWD3Q6PCD5 774 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MAP7D3Q8IWC1 876 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 YAF2Q8IY57 180 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 LGI2Q8N0V4 545 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 SLC44A3Q8N4M1 653 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 IRF7Q92985 503 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 TMA16Q96EY4 203 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 ASIC4Q96FT7 647 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 EPAS1Q99814 870 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 KLHL11Q9NVR0 708 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 RCOR3Q9P2K3 495 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 KIF26AQ9ULI4 1882 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 VANGL2Q9ULK5 521 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 MYO10Q9HD67 2058 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 LRRD1A4D1F6 860 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 TRDMT1O14717 391 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 CREB3O43889 395 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
NIF3L1-201ENST00000359683 KRT1P04264 644 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms