RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KRT6CP48668 564 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 RAD23AP54725 363 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 TSNQ15631 228 aaKnown RBP18.77■□□□□ 0.6
SHANK1-202ENST00000359082 ARHGEF19Q8IW93 802 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 TMEM159Q96B96 161 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 SPACA7Q96KW9 195 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 BCL2L14Q9BZR8 327 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 SEMA6AQ9H2E6 1030 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 TSPAN16Q9UKR8 245 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF839A8K0R7 811 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 TUBP50607 506 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 FBXO47Q5MNV8 452 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 FBXO25Q8TCJ0 367 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 BBS4Q96RK4 519 aa18.77■□□□□ 0.6
SHANK1-202ENST00000359082 CDK5RAP1Q96SZ6 601 aaKnown RBP18.77■□□□□ 0.6
SHANK1-202ENST00000359082 NDST1P52848 882 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 SPANXN3Q5MJ09 141 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 TMC5Q6UXY8 1006 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 ADAM32Q8TC27 787 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 TMEM237Q96Q45 408 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 FKBP6O75344 327 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 ELK3P41970 407 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 HLA-DQA1Q5Y7H0 255 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 PRMT9Q6P2P2 845 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 TMC2Q8TDI7 906 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 SLC9A8Q9Y2E8 581 aa18.77■□□□□ 0.59
SHANK1-202ENST00000359082 C1orf232A0A0U1RR37 186 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 MAGEB16A2A368 324 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 DNAJB3Q8WWF6 145 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 NSMCE2Q96MF7 247 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 CPNE1Q99829 537 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 SENP6Q9GZR1 1112 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 ZFYVE1Q9HBF4 777 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 MILR1Q7Z6M3 343 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 UBASH3BQ8TF42 649 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 SYT15Q9BQS2 421 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 IL25Q9H293 177 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 FBXO10Q9UK96 956 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 TMEM191CA6NGB0 347 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 CHURC1-FNTBB4DL54 471 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 BACE1P56817 501 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 CYP2R1Q6VVX0 501 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 ENGASEQ8NFI3 743 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 AHCYL2Q96HN2 611 aaKnown RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 RNF145Q96MT1 663 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 APBA2Q99767 749 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 PPIEQ9UNP9 301 aaKnown RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 CENPXA8MT69 81 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 BCL10O95999 233 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 AMPD1P23109 780 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 PTPN3P26045 913 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 MCL1Q07820 350 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 TOMM20Q15388 145 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 DNAJC14Q6Y2X3 702 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 IZUMO1Q8IYV9 350 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 TMEM132CQ8N3T6 1108 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 RSPH9Q9H1X1 276 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-202ENST00000359082 PCDHB5Q9Y5E4 795 aa18.76■□□□□ 0.59
SHANK1-202ENST00000359082 OR56A5P0C7T3 313 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 VAV1P15498 845 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 CDH17Q12864 832 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 CLYBLQ8N0X4 340 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 SVOPQ8N4V2 548 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 OXNAD1Q96HP4 312 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 ADPRHL2Q9NX46 363 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 PNPLA6Q8IY17 1366 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 RAMP2O60895 175 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 CCDC130P13994 396 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 KLRC2P26717 231 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 PTPAQ15257 358 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 SNX30Q5VWJ9 437 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 PRCCQ92733 491 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 DPF3Q92784 378 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 FUT8Q9BYC5 575 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 ZNF624Q9P2J8 865 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 TYMPP19971 482 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 NPY2RP49146 381 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 GRIK4Q16099 956 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 TMC7Q7Z402 723 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 LGI2Q8N0V4 545 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 LRRC39Q96DD0 335 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 CYP3A43Q9HB55 503 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 MYL12BO14950 172 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 AKAP3O75969 853 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 ALOX12P18054 663 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 PAICSP22234 425 aaKnown RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 FNDC3BQ53EP0 1204 aaKnown RBP18.75■□□□□ 0.59
SHANK1-202ENST00000359082 WDR93Q6P2C0 686 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 MCOLN2Q8IZK6 566 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 MOSPD2Q8NHP6 518 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 ANKRD6Q9Y2G4 727 aa18.75■□□□□ 0.59
SHANK1-202ENST00000359082 LMTK2Q8IWU2 1503 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms