RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TSNQ15631 228 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 KIAA1324Q6UXG2 1013 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 HIST3H2AQ7L7L0 130 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 GATAD2AQ86YP4 633 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 HIST1H2ACQ93077 130 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ERP27Q96DN0 273 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 C9orf72Q96LT7 481 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ACOX2Q99424 681 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TBL1YQ9BQ87 522 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CBWD1Q9BRT8 395 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NAT9Q9BTE0 207 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 EHD4Q9H223 541 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 POLR1BQ9H9Y6 1135 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TMEM131LA2VDJ0 1609 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SLCO1B7G3V0H7 640 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CNOT3O75175 753 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 KCNA3P22001 575 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MAPK8P45983 427 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 GPR15P49685 360 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NUP107P57740 925 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 LAMTOR4Q0VGL1 99 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ORC1Q13415 861 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FSCN1Q16658 493 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CBWD6Q4V339 395 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CBWD3Q5JTY5 395 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CBWD5Q5RIA9 395 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 BNC2Q6ZN30 1099 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 LRRC74BQ6ZQY2 392 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 LGI2Q8N0V4 545 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MARCH10Q8NA82 808 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NSL1Q96IY1 281 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TBCBQ99426 244 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 RSPH9Q9H1X1 276 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 DDX43Q9NXZ2 648 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 DUSP12Q9UNI6 340 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MTRF1O75570 445 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 IFNA16P05015 189 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 S100GP29377 79 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TKTP29401 623 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 COILP38432 576 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ANTXR2P58335 489 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CRY1Q16526 586 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 KYNUQ16719 465 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ACAD10Q6JQN1 1059 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SLC27A1Q6PCB7 646 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TXNRD3Q86VQ6 643 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CXorf40BQ96DE9 158 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PACSIN1Q9BY11 444 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 KLHL1Q9NR64 748 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PXMP2Q9NR77 195 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 INTS7Q9NVH2 962 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 COMMD8Q9NX08 183 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ARHGAP28Q9P2N2 729 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TMCO1Q9UM00 188 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CNTNAP5Q8WYK1 1306 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 O00370 1275 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 XPO1O14980 1071 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM24O15164 1050 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ABCB1P08183 1280 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PGAM1P18669 254 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CTNNB1P35222 781 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MARSP56192 900 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CDH17Q12864 832 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MARC1Q5VT66 337 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TTC23Q5W5X9 447 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CAMK1DQ8IU85 385 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FBXO36Q8NEA4 188 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 RERGQ96A58 199 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF558Q96NG5 402 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SH3BP4Q9P0V3 963 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 VANGL2Q9ULK5 521 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 TAF6LQ9Y6J9 622 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 THRAP10827 490 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 RRM1P23921 792 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 VAC14Q08AM6 782 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NFIL3Q16649 462 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PABPC1LQ4VXU2 614 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SEL1L3Q68CR1 1132 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 STK40Q8N2I9 435 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PROX1Q92786 737 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ADAM33Q9BZ11 813 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NMRAL1Q9HBL8 299 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 AASDHPPTQ9NRN7 309 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 AGPAT3Q9NRZ7 376 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 UBA2Q9UBT2 640 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-202ENST00000356435 TMEM120BA0PK00 339 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 BAIAP3O94812 1187 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 PAICSP22234 425 aaKnown RBP5.65□□□□□ -1.5
PTPRD-202ENST00000356435 OR1E1P30953 314 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.5
PTPRD-202ENST00000356435 ERVK-24P63145 666 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 BCL2L1Q07817 233 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 INSCQ1MX18 579 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 Q4G0T1 1027 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 TFDP3Q5H9I0 405 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 HPS3Q969F9 1004 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 LENG9Q96B70 501 aa5.65□□□□□ -1.5
PTPRD-202ENST00000356435 CXCL11O14625 94 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms