RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
LSS-201ENST00000356396 GRID1Q9ULK0 1009 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 STAP1Q9ULZ2 295 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 PDCD11Q14690 1871 aaKnown RBP14.3□□□□□ -0.12
LSS-201ENST00000356396 C2orf71A6NGG8 1288 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 SLMAPQ14BN4 828 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 ZNF697Q5TEC3 545 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 VSTM1Q6UX27 236 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 PPIL6Q8IXY8 311 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 HTR3CQ8WXA8 447 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
LSS-201ENST00000356396 PABPC5Q96DU9 382 aaKnown RBP14.3□□□□□ -0.12
LSS-201ENST00000356396 SLC22A12Q96S37 553 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 PSAT1Q9Y617 370 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 USP3Q9Y6I4 520 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 BRWD1Q9NSI6 2320 aa14.3□□□□□ -0.12
LSS-201ENST00000356396 CCDC195A0A1B0GUA6 201 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 TCRBV9S1A1TA0A576 114 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 DNAJC6O75061 913 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 PMPCBO75439 489 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 DAB1O75553 588 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 SEC24AO95486 1093 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 RPA3P35244 121 aaPredicted RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 PTPN9P43378 593 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 ITKQ08881 620 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 TFDP2Q14188 446 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 PTPRCAPQ14761 206 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 SLC9A4Q6AI14 798 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 LRRC34Q8IZ02 419 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 FBXO32Q969P5 355 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 PKMYT1Q99640 499 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 MECRQ9BV79 373 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 FEZ2Q9UHY8 353 aaPredicted RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 MTF2Q9Y483 593 aaPredicted RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 TRIM43BA6NCK2 446 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 M0QZQ0 153 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 EIF3HO15372 352 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■□□□□ 9.6
LSS-201ENST00000356396 ERVK-10P10266 1014 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 MYOGP15173 224 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 RPL9P32969 192 aaKnown RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 ACADSBP45954 432 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 ALDH7A1P49419 539 aaKnown RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 OVGP1Q12889 678 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 PCBP1Q15365 356 aaKnown RBP eCLIP14.29□□□□□ -0.123e-7■■■■■ 27.3
LSS-201ENST00000356396 CENPUQ71F23 418 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 SPATA6LQ8N4H0 392 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 TRIM43Q96BQ3 446 aaPredicted RBP14.29□□□□□ -0.12
LSS-201ENST00000356396 SLC17A7Q9P2U7 560 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 MYOFQ9NZM1 2061 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 CFAP54Q96N23 3096 aa14.29□□□□□ -0.12
LSS-201ENST00000356396 SLC12A8A0AV02 714 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 J3KR12 359 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 ATF6P18850 670 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 KRT4P19013 534 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 GLDCP23378 1020 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 SEMG2Q02383 582 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 WASHC5Q12768 1159 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 STXBP5Q5T5C0 1151 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 PDIK1LQ8N165 341 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 SLC25A41Q8N5S1 370 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TFB1MQ8WVM0 346 aaKnown RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 PAFAH2Q99487 392 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 ELAC2Q9BQ52 826 aaKnown RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 NACA2Q9H009 215 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 CYP4F11Q9HBI6 524 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 INTS9Q9NV88 658 aaKnown RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 FGFR1OP2Q9NVK5 253 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 CDH22Q9UJ99 828 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 C2orf78A6NCI8 922 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TNFRSF10BO14763 440 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 HAPLN1P10915 354 aaPredicted RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 TUBP50607 506 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 RAB27AP51159 221 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 COPS2P61201 443 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 ZNF534Q76KX8 674 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 DNAAF3Q8N9W5 541 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 OR52K2Q8NGK3 314 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 ZNF512Q96ME7 567 aaPredicted RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 LBHD1Q9BQE6 289 aaPredicted RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 ZNF358Q9NW07 568 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TMEM161AQ9NX61 479 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 FBXW11Q9UKB1 542 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 MTMR11A4FU01 709 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 HMGB1P1B2RPK0 211 aaPredicted RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 NFKB1P19838 968 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 IFT88Q13099 833 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 PLD1Q13393 1074 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 TAZQ16635 292 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 PIK3R6Q5UE93 754 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 ACVR1CQ8NER5 493 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 STK32AQ8WU08 396 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 IGSF8Q969P0 613 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 MFSD3Q96ES6 412 aa14.28□□□□□ -0.12
LSS-201ENST00000356396 PAK6Q9NQU5 681 aaPredicted RBP14.28□□□□□ -0.12
LSS-201ENST00000356396 LCHNA4D1U4 455 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms