RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
HOXA1-202ENST00000355633 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CFAP69A5D8W1 941 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 C2orf78A6NCI8 922 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 OAS1P00973 400 aaKnown RBP14.05□□□□□ -0.16
HOXA1-202ENST00000355633 F11P03951 625 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FAM153BP0C7A2 387 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 ITIH2P19823 946 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 IVDP26440 423 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 HOXC13P31276 330 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 MTA1Q13330 715 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FAM153CQ494X1 144 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 SLC45A4Q5BKX6 768 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 MS4A13Q5J8X5 152 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 PPM1LQ5SGD2 360 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 PIK3R6Q5UE93 754 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FAM71DQ8N9W8 422 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CAVIN3Q969G5 261 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 GDF15Q99988 308 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CATSPERBQ9H7T0 1116 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 ZDHHC18Q9NUE0 388 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FAM153AQ9UHL3 310 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 OBSL1O75147 1896 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 E9PAM4 449 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FGF10O15520 208 aaPredicted RBP14.05□□□□□ -0.16
HOXA1-202ENST00000355633 KCNN4O15554 427 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 GABRR2P28476 465 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 RBL1P28749 1068 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 SERPINB6P35237 376 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 COG7P83436 770 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 ACBD5Q5T8D3 534 aaPredicted RBP14.05□□□□□ -0.16
HOXA1-202ENST00000355633 ZDHHC24Q6UX98 284 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 RTL10Q7L3V2 364 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CCDC33Q8N5R6 958 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 BBOF1Q8ND07 529 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FBXO25Q8TCJ0 367 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 ART4Q93070 314 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FMO2Q99518 471 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 FAM129AQ9BZQ8 928 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CERS4Q9HA82 394 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
HOXA1-202ENST00000355633 CLASP2O75122 1294 aaKnown RBP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 C1RP00736 705 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 KCNQ1P51787 676 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 GPS1Q13098 491 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 AUHQ13825 339 aaKnown RBP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 PDK1Q15118 436 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 P3H1Q32P28 736 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 C14orf80Q86SX3 495 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 TMC8Q8IU68 726 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 SLC22A17Q8WUG5 538 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 TFB1MQ8WVM0 346 aaKnown RBP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 LRRC45Q96CN5 670 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 QKIQ96PU8 341 aaKnown RBP eCLIP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 RNF38Q9H0F5 515 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 NKX2-4Q9H2Z4 354 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 USP29Q9HBJ7 922 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 MTRF1LQ9UGC7 380 aaKnown RBP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 MSRAQ9UJ68 235 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 RAD54BQ9Y620 910 aa14.04□□□□□ -0.16
HOXA1-202ENST00000355633 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
HOXA1-202ENST00000355633 PPP1R12AO14974 1030 aaPredicted RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 CCL16O15467 120 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 HARS2P49590 506 aaKnown RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 RAB30Q15771 203 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 IZUMO3Q5VZ72 239 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 RAP1GAP2Q684P5 730 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 HEATR6Q6AI08 1181 aaKnown RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 LRRC31Q6UY01 552 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 HDXQ7Z353 690 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 NPWQ8N729 165 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 MRPS31Q92665 395 aaKnown RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 PLD4Q96BZ4 506 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 LRRC3Q9BY71 257 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 FUT8Q9BYC5 575 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 VANGL2Q9ULK5 521 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 DNALI1O14645 258 aaPredicted RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 NCAM2O15394 837 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 MBL2P11226 248 aaPredicted RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 CDC25CP30307 473 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 RPL22P35268 128 aaKnown RBP14.03□□□□□ -0.16
HOXA1-202ENST00000355633 ACTN2P35609 894 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 ITGA8P53708 1063 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 CAV1Q03135 178 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 CASP8Q14790 479 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 ARTNQ5T4W7 220 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 PPP2R2DQ66LE6 453 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 GAREM2Q75VX8 874 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 NETO2Q8NC67 525 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 RTP4Q96DX8 246 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 GCNAQ96QF7 691 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 LGMNQ99538 433 aa14.03□□□□□ -0.16
HOXA1-202ENST00000355633 CORO1BQ9BR76 489 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms