RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TBC1D30Q9Y2I9 924 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RIMS1Q86UR5 1692 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GALCP54803 685 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ACTR3P61158 418 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RBP5P82980 135 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 SQLEQ14534 574 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 KIAA1841Q6NSI8 718 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 EDC3Q96F86 508 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 ZCWPW1Q9H0M4 648 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TAS2R7Q9NYW3 318 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 EEF2KO00418 725 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 DNAJB1P25685 340 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CDK18Q07002 472 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 SLC5A9Q2M3M2 681 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ANKRD26P1Q6NSI1 321 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TMEM26Q6ZUK4 368 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TIGD4Q8IY51 512 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 AFG1LQ8WV93 481 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RANBP3Q9H6Z4 567 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 H0YIN7 160 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GOLGA8SH3BPF8 625 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ZCCHC18P0CG32 403 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 C10orf62Q5T681 223 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 TRIM74Q86UV6 250 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TRIM73Q86UV7 250 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 SRBD1Q8N5C6 995 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 RPRD1AQ96P16 312 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 NECTIN3Q9NQS3 549 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ENTPD7Q9NQZ7 604 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CHORDC1Q9UHD1 332 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 TRHDEQ9UKU6 1024 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ANKRD36CQ5JPF3 1778 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 MGAT4DA6NG13 374 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 PDLIM1O00151 329 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 SGTAO43765 313 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TMCC2O75069 709 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RAPGEF3O95398 923 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 HTR7P34969 479 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 DENND5AQ6IQ26 1287 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CDH19Q9H159 772 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 PCDH10Q9P2E7 1040 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 EMSYQ7Z589 1322 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ISPDA4D126 451 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 AP3D1O14617 1153 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CPA1P15085 419 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GPD2P43304 727 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RDH12Q96NR8 316 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 PLA2G12BQ9BX93 195 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GNPTGQ9UJJ9 305 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 PCDHB6Q9Y5E3 794 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 A0A0G2JPF8 293 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 HNRNPCL3B7ZW38 293 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GPIP06744 558 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 HNRNPCL4P0DMR1 293 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 PRKG2Q13237 762 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 NDNQ99608 321 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 COPS7BQ9H9Q2 264 aaPredicted RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CDK5RAP2Q96SN8 1893 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CYP2U1Q7Z449 544 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ZC3H10Q96K80 434 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 NIF3L1Q9GZT8 377 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GALNT8Q9NY28 637 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 GSTT2BP0CG30 244 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ZNF549Q6P9A3 640 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 QRFPRQ96P65 431 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 NT5C1AQ9BXI3 368 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TRIM2Q9C040 744 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ASB14A6NK59 587 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 CREMQ03060 361 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 BLMHQ13867 455 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ZDHHC20Q5W0Z9 365 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 OR6B2Q6IFH4 312 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 ERAP2Q6P179 960 aa8.19□□□□□ -1.1
HTT-201ENST00000355072 TDRD1Q9BXT4 1180 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 AGO2Q9UKV8 859 aaKnown RBP8.19□□□□□ -1.1
HTT-201ENST00000355072 ARPC4-TTLL3A0A0A6YYG9 625 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 M0R2C6 588 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 EML1O00423 815 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 PRPF4O43172 522 aaKnown RBP eCLIP8.18□□□□□ -1.1
HTT-201ENST00000355072 GUCY1A2P33402 732 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 TKFCQ3LXA3 575 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 LRRC38Q5VT99 294 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 KCNV2Q8TDN2 545 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 RIN2Q8WYP3 895 aaPredicted RBP8.18□□□□□ -1.1
HTT-201ENST00000355072 CRELD1Q96HD1 420 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 MEMO1Q9Y316 297 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 PTPRUQ92729 1446 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 LRRC24Q50LG9 513 aa8.18□□□□□ -1.1
HTT-201ENST00000355072 ZNF655Q8N720 491 aaPredicted RBP8.18□□□□□ -1.1
HTT-201ENST00000355072 CNKSR1Q969H4 720 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms