RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PURAQ00577 322 aaKnown RBP22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 NIPAL4Q0D2K0 466 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 WASHC5Q12768 1159 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 FAM91A1Q658Y4 838 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 PGAP3Q96FM1 320 aaPredicted RBP22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 ZFP42Q96MM3 310 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 TRIM56Q9BRZ2 755 aaKnown RBP22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 CHST12Q9NRB3 414 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 MYL2P10916 166 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 SERPINB3P29508 390 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 MAP2K2P36507 400 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 ARL13BQ3SXY8 428 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 WASHC2DQ5SRD0 308 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 RGMBQ6NW40 437 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 ZNF567Q8N184 647 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 STKLD1Q8NE28 680 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 SLC7A14Q8TBB6 771 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 ATP2A3Q93084 1043 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 SYT15Q9BQS2 421 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 ULBP1Q9BZM6 244 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 CRTAC1Q9NQ79 661 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 NR2E3Q9Y5X4 410 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 PTCH2Q9Y6C5 1203 aa22.89■■□□□ 1.25
NKX2-1-201ENST00000354822 F9P00740 461 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 IGHA2P01877 340 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 ATP5BP06576 529 aaKnown RBP22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 THP07101 528 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 BPGMP07738 259 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 SESN2P58004 480 aaPredicted RBP22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 MRPS6P82932 125 aaKnown RBP22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 BST1Q10588 318 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 KIAA0319Q5VV43 1072 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 SH3TC2Q8TF17 1288 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 ARNTL2Q8WYA1 636 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 SEPT10Q9P0V9 454 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 FBXW11Q9UKB1 542 aa22.88■■□□□ 1.25
NKX2-1-201ENST00000354822 AP1G2O75843 785 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 FYNP06241 537 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 POLBP06746 335 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 CALB2P22676 271 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 MGAT1P26572 445 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 PSMB4P28070 264 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 CHI3L2Q15782 390 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 INTS6LQ5JSJ4 861 aaKnown RBP22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 RAB41Q5JT25 222 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 PID1Q7Z2X4 250 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 RSPH3Q86UC2 560 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 CRLF3Q8IUI8 442 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 PGBD4Q96DM1 585 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 PTCD3Q96EY7 689 aaKnown RBP22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 ZFYVE28Q9HCC9 887 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 TMPRSS4Q9NRS4 437 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 FAM105AQ9NUU6 356 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 CDH9Q9ULB4 789 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 NRP1O14786 923 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 MTSS1O43312 755 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 RARBP10826 455 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 INHBEP58166 350 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 OCRLQ01968 901 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 CRYMQ14894 314 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 PACS1Q6VY07 963 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 HFE2Q6ZVN8 426 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 FAM13CQ8NE31 585 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 BTBD10Q9BSF8 475 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 MECRQ9BV79 373 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 WDR6Q9NNW5 1121 aaKnown RBP22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 DCDC2Q9UHG0 476 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 TRPV2Q9Y5S1 764 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 NUMBLQ9Y6R0 609 aa22.87■■□□□ 1.25
NKX2-1-201ENST00000354822 ERCC2P18074 760 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 RPL9P32969 192 aaKnown RBP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 SEMA3BQ13214 749 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 SPANXN3Q5MJ09 141 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 DSTYKQ6XUX3 929 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 PAXIP1Q6ZW49 1069 aaPredicted RBP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 FAM35AQ86V20 835 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 GSTCDQ8NEC7 633 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 SMOQ99835 787 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 FAM237BA0A1B0GVD1 139 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 YJEFN3A6XGL0 299 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 E7ENQ6 273 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 TNPO2O14787 897 aaKnown RBP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 GLRA3O75311 464 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 SNNO75324 88 aaPredicted RBP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 EPHB2P29323 1055 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 TPI1P60174 286 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 TEX44Q53QW1 395 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 GIMAP7Q8NHV1 300 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 PCED1BQ96HM7 432 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 KLHL8Q9P2G9 620 aaPredicted RBP22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 ST3GAL5Q9UNP4 418 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 C15orf41Q9Y2V0 281 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 CDY2AQ9Y6F7 541 aa22.86■■□□□ 1.25
NKX2-1-201ENST00000354822 ERI2A8K979 691 aaKnown RBP22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 SLC10A3P09131 477 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 MX2P20592 715 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 PCSK1P29120 753 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 STX3Q13277 289 aa22.85■■□□□ 1.25
NKX2-1-201ENST00000354822 SAPCD2Q86UD0 394 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms