RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 USP28Q96RU2 1077 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 ARID3AQ99856 593 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 SERGEFQ9UGK8 458 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 FZD4Q9ULV1 537 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
COPE-202ENST00000349893 CLCA2Q9UQC9 943 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 NCKAP1Q9Y2A7 1128 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 COL12A1Q99715 3063 aa16.4■□□□□ 0.22
COPE-202ENST00000349893 BOD1L1Q8NFC6 3051 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 CLSTN1O94985 981 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 ATP5BP06576 529 aaKnown RBP16.39■□□□□ 0.21
COPE-202ENST00000349893 GLDCP23378 1020 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 UCNP55089 124 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 CEBPZQ03701 1054 aaKnown RBP16.39■□□□□ 0.21
COPE-202ENST00000349893 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 MPP7Q5T2T1 576 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 PPP1R26Q5T8A7 1209 aaPredicted RBP16.39■□□□□ 0.21
COPE-202ENST00000349893 MBLAC2Q68D91 279 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 PM20D1Q6GTS8 502 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 BHLHA9Q7RTU4 235 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 OXR1Q8N573 874 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 ZNF248Q8NDW4 579 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 OR2T34Q8NGX1 318 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 IRX2Q9BZI1 471 aaPredicted RBP16.39■□□□□ 0.21
COPE-202ENST00000349893 CLMPQ9H6B4 373 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 FBXL12Q9NXK8 326 aa16.39■□□□□ 0.21
COPE-202ENST00000349893 LRRC72A6NJI9 287 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 WNT9AO14904 365 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 DXOO77932 396 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 PDCP20941 246 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 HARS2P49590 506 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 YWHAGP61981 247 aaKnown RBP eCLIP16.38■□□□□ 0.21
COPE-202ENST00000349893 SFSWAPQ12872 951 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 HNRNPA1L2Q32P51 320 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 PROX2Q3B8N5 592 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 RSRC2Q7L4I2 434 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 FMNL3Q8IVF7 1028 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 TMA16Q96EY4 203 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 LMLNQ96KR4 655 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 SEMA4CQ9C0C4 833 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
COPE-202ENST00000349893 HBS1LQ9Y450 684 aaKnown RBP16.38■□□□□ 0.21
COPE-202ENST00000349893 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 B8ZZF3 427 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 TLR4O00206 839 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 LATO43561 262 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 HLA-DRAP01903 254 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 PCBP4P57723 403 aaKnown RBP16.37■□□□□ 0.21
COPE-202ENST00000349893 TMPRSS3P57727 454 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 BNIP3Q12983 259 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 IQUBQ8NA54 791 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 KDM1BQ8NB78 822 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 WFDC5Q8TCV5 224 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 TTC9Q92623 222 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 TTC17Q96AE7 1141 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 ZNF578Q96N58 590 aaPredicted RBP16.37■□□□□ 0.21
COPE-202ENST00000349893 LGMNQ99538 433 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 NEUROG2Q9H2A3 272 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 SLC39A2Q9NP94 309 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 AASDHPPTQ9NRN7 309 aa16.37■□□□□ 0.21
COPE-202ENST00000349893 OLA1Q9NTK5 396 aaKnown RBP16.37■□□□□ 0.21
COPE-202ENST00000349893 FAM47DPA6NHR8 397 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 C6P13671 934 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 POLR2EP19388 210 aaKnown RBP16.36■□□□□ 0.21
COPE-202ENST00000349893 CD70P32970 193 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 SGSHP51688 502 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 E2F1Q01094 437 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 CUL4AQ13619 759 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 CST6Q15828 149 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 PIGZQ86VD9 579 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 DHX58Q96C10 678 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 NIF3L1Q9GZT8 377 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 MTG2Q9H4K7 406 aa16.36■□□□□ 0.21
COPE-202ENST00000349893 A0A1W2PP55 124 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 MID1O15344 667 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 ARHGAP6O43182 974 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
COPE-202ENST00000349893 SIN3BO75182 1162 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 KIF20AO95235 890 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 ZBED1O96006 694 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 SLC45A4Q5BKX6 768 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 C9orf64Q5T6V5 341 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 CDCP2Q5VXM1 449 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 IQCHQ86VS3 1027 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 SPATS2Q86XZ4 545 aaKnown RBP16.35■□□□□ 0.21
COPE-202ENST00000349893 ZNF557Q8N988 423 aaPredicted RBP16.35■□□□□ 0.21
COPE-202ENST00000349893 FAM181AQ8N9Y4 354 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 MFSD2AQ8NA29 543 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 GANCQ8TET4 914 aa16.35■□□□□ 0.21
COPE-202ENST00000349893 FAM131CQ96AQ9 280 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms