RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RSPH10BP0C881 870 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 COPAP53621 1224 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CYP4F8P98187 520 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 GRSF1Q12849 480 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFC1-201ENST00000349703 MBTPS1Q14703 1052 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 MAPKAPK3Q16644 382 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FSCBQ5H9T9 825 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FAM47AQ5JRC9 791 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 KIAA0319Q5VV43 1072 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 TRMT10CQ7L0Y3 403 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 CD302Q8IX05 232 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PDZD8Q8NEN9 1154 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PIP4K2CQ8TBX8 421 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ZFYVE19Q96K21 471 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 KCNC2Q96PR1 638 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 LRRC1Q9BTT6 524 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ELL3Q9HB65 397 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 ITM2CQ9NQX7 267 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 AP5S1Q9NUS5 200 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 TBC1D7Q9P0N9 293 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ANKFY1Q9P2R3 1169 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 EIF3KQ9UBQ5 218 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 APEX2Q9UBZ4 518 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SALL1Q9NSC2 1324 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 MAP2P11137 1827 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 SYNJ2BP-COX16A0A087WUM0 186 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 LRRIQ4A6NIV6 560 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 DVL1O14640 695 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 BCAT2O15382 392 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 TBX18O95935 607 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 ATP2A2P16615 1042 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 IFNAR1P17181 557 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 RCAN1P53805 252 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 DVL1P1P54792 670 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 PTPN20Q4JDL3 420 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FBXO31Q5XUX0 539 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 COPS6Q7L5N1 327 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 UEVLDQ8IX04 471 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CLYBLQ8N0X4 340 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FAM71DQ8N9W8 422 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PIK3C3Q8NEB9 887 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 DYDC2Q96IM9 177 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CCNL2Q96S94 520 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PCDHB16Q9NRJ7 776 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 OXSMQ9NWU1 459 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 HIF3AQ9Y2N7 669 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 A0A1W2PRG0 241 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CCT8L1PA6NM43 557 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SOBPA7XYQ1 873 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 STX16O14662 325 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 NVLO15381 856 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 TSPAN3O60637 253 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 LRATO95237 230 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ATP6V1G2O95670 118 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 MAPTP10636 758 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 THBS4P35443 961 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FXR1P51114 621 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFC1-201ENST00000349703 VCPP55072 806 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 LSM11P83369 360 aaKnown RBP eCLIP6.14□□□□□ -1.438e-9■■■■■ 51
RFC1-201ENST00000349703 TOR1AIP1Q5JTV8 583 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 WLSQ5T9L3 541 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 RETSATQ6NUM9 610 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 MB21D2Q8IYB1 491 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 PRR18Q8N4B5 295 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SNX27Q96L92 541 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PSMB7Q99436 277 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SLC12A6Q9UHW9 1150 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CPDO75976 1380 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ABCC12Q96J65 1359 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 PGRMC1O00264 195 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 ZNF609O15014 1411 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 AHCYL1O43865 530 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 GNA14O95837 355 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FGAP02671 866 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 NFICP08651 508 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ALOX5P09917 674 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CALCOCO2Q13137 446 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CUL3Q13618 768 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 STOX1Q6ZVD7 989 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 LRRC8DQ7L1W4 858 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 SPATA24Q86W54 205 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 TRIM59Q8IWR1 403 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 TMEFF1Q8IYR6 380 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FBXO39Q8N4B4 442 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 DNAJC5GQ8N7S2 189 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 BOLLQ8N9W6 283 aaKnown RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 TMEM145Q8NBT3 493 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 GOT1L1Q8NHS2 421 aaPredicted RBP6.14□□□□□ -1.43
RFC1-201ENST00000349703 MDM1Q8TC05 714 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 TMEM143Q96AN5 459 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 NFKBIZQ9BYH8 718 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 CASS4Q9NQ75 786 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 ENTPD7Q9NQZ7 604 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 DPP3Q9NY33 737 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms