RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 UGT1A4P22310 534 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 UGT1A3P35503 534 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 UGT1A5P35504 534 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 ETFBP38117 255 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 ZBTB41Q5SVQ8 909 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 GPR107Q5VW38 600 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 C15orf52Q6ZUT6 534 aaKnown RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 GPR180Q86V85 440 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 TMEM102Q8N9M5 508 aaPredicted RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 OR5B17Q8NGF7 314 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 NEURL2Q9BR09 285 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 WDR41Q9HAD4 459 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PRSS51A0A1B0GVH4 220 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 TCRBV5S1A1TA0A578 114 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PRDX6P30041 224 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 MIPP30301 263 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PSMC1P62191 440 aaKnown RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 BNIP3Q12983 259 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PIGGQ5H8A4 983 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 NANOGP8Q6NSW7 305 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 CASP10Q92851 521 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PPWD1Q96BP3 646 aaKnown RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 SLC29A1Q99808 456 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 FRMD8P1Q9BZ68 369 aaPredicted RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 FAM96AQ9H5X1 160 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 PAK5Q9P286 719 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 SBF2Q86WG5 1849 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 F7P08709 466 aaPredicted RBP15.74■□□□□ 0.11
LMNA-201ENST00000347559 GRK2P25098 689 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 DPP6P42658 865 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 SERPINB9P50453 376 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 TMEM198Q66K66 360 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 C17orf50Q8WW18 174 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 FERMT1Q9BQL6 677 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.74■□□□□ 0.11
LMNA-201ENST00000347559 ZNF541Q9H0D2 1346 aa15.74■□□□□ 0.11
LMNA-201ENST00000347559 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 SERPINB2P05120 415 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 CCDC130P13994 396 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 CD247P20963 164 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 SP4Q02446 784 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 SEPT6Q14141 434 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 IKBKEQ14164 716 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 EGFLAMQ63HQ2 1017 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 APOBEC3HQ6NTF7 200 aaKnown RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 FIBCD1Q8N539 461 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 WDTC1Q8N5D0 677 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 ARHGEF1Q92888 912 aaKnown RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 IMPG2Q9BZV3 1241 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 CLK4Q9HAZ1 481 aaKnown RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 PNPLA3Q9NST1 481 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 RBAKQ9NYW8 714 aaPredicted RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 COPG2Q9UBF2 871 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 DHX15O43143 795 aaKnown RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 ENTPD3O75355 529 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 TYK2P29597 1187 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 CDO1Q16878 200 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 MTX3Q5HYI7 312 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 FGD3Q5JSP0 725 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 DNAJC14Q6Y2X3 702 aaPredicted RBP15.73■□□□□ 0.11
LMNA-201ENST00000347559 GMCL1P1Q8NEA9 526 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 TFAP2BQ92481 460 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 APBB2Q92870 758 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 NPAS2Q99743 824 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 PCDHAC1Q9H158 963 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 PI4KBQ9UBF8 816 aa15.73■□□□□ 0.11
LMNA-201ENST00000347559 RGSL1A5PLK6 1076 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 FAM159BA6NKW6 160 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 ALDH2P05091 517 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 MCF2P10911 925 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 CKMT2P17540 419 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TCF7P36402 384 aaPredicted RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 NOMO1Q15155 1222 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 ZNF829Q3KNS6 432 aaPredicted RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 C6orf183Q5T699 404 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 SLC7A5P1Q8MH63 180 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 MPHOSPH6Q99547 160 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 CDH19Q9H159 772 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TRPC7Q9HCX4 862 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 XPNPEP3Q9NQH7 507 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 TMED5Q9Y3A6 229 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 AP4S1Q9Y587 144 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 WDR46O15213 610 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 EXTL3O43909 919 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TBXAS1P24557 533 aaPredicted RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 ITGADQ13349 1161 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 PTPN20Q4JDL3 420 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 RAB6CQ53S08 254 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 SH3PXD2AQ5TCZ1 1133 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms