RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 GCATO75600 419 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 SYF2O95926 243 aaKnown RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 MOCS2O96007 188 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 SRGAP2BP0DMP2 458 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 RING1Q06587 406 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 MTA1Q13330 715 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 PRKD1Q15139 912 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 MIB1Q86YT6 1006 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 HTR3CQ8WXA8 447 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 CPT1BQ92523 772 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 PRCCQ92733 491 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 SH3GL2Q99962 352 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 LBHD1Q9BQE6 289 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 BRD8Q9H0E9 1235 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 CCSER2Q9H7U1 834 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 HS3ST4Q9Y661 456 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 IGLV3-27P01718 113 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 MX2P20592 715 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 CA8P35219 290 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 EPHB3P54753 998 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 NRLP54845 237 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 MLLT6P55198 1093 aaPredicted RBP22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 BASP1P80723 227 aaKnown RBP22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 TWF1Q12792 350 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 ACBD5Q5T8D3 534 aaPredicted RBP22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 DENND2CQ68D51 928 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 RWDD4Q6NW29 188 aaKnown RBP22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 RELL1Q8IUW5 271 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 NAT8LQ8N9F0 302 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 ZBTB9Q96C00 473 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 SEMA4AQ9H3S1 761 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 PRDM12Q9H4Q4 367 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 TRPM5Q9NZQ8 1165 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 DNMT3LQ9UJW3 386 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 NEU3Q9UQ49 428 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 LZTS1Q9Y250 596 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 HBS1LQ9Y450 684 aaKnown RBP22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 INSL5Q9Y5Q6 135 aa22.12■■□□□ 1.13
TSPAN3-202ENST00000346495 ZNF840PA6NDX5 716 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 H0YGN5 161 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 STK10O94804 968 aaKnown RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 CXCL14O95715 111 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 CNPP09543 421 aaKnown RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 ATP5C1P36542 298 aaKnown RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 BMPR1AP36894 532 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 PPP3CCP48454 512 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 EIF3BP55884 814 aaKnown RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 PLD1Q13393 1074 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 TMC7Q7Z402 723 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 CCDC33Q8N5R6 958 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 LRRN4Q8WUT4 740 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 BTN2A3PQ96KV6 586 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 LGMNQ99538 433 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 EPB41L4BQ9H329 900 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 UXTQ9UBK9 157 aaPredicted RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 XPO7Q9UIA9 1087 aaKnown RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 ZMYND8Q9ULU4 1186 aaPredicted RBP22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 RWDD3Q9Y3V2 267 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 NFS1Q9Y697 457 aa22.11■■□□□ 1.13
TSPAN3-202ENST00000346495 E9PAM4 449 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 RIPK2O43353 540 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 NUDT17P0C025 328 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 VAV1P15498 845 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 CTNNB1P35222 781 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 AP1B1Q10567 949 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 HECTD3Q5T447 861 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 KLHDC10Q6PID8 442 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 NPWQ8N729 165 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 CCNYQ8ND76 341 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 CCDC110Q8TBZ0 833 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 RBM15Q96T37 977 aaKnown RBP eCLIP22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 PHACTR1Q9C0D0 580 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 KLC2Q9H0B6 622 aa22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 CDC42EP4Q9H3Q1 356 aaKnown RBP22.1■■□□□ 1.13
TSPAN3-202ENST00000346495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 LCHNA4D1U4 455 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 GOLGA8KD6RF30 607 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 CHADO15335 359 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 TUBP50607 506 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 GALNT2Q10471 571 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 PIK3R6Q5UE93 754 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 ITIH5Q86UX2 942 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 TAB3Q8N5C8 712 aaPredicted RBP22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 LZTR1Q8N653 840 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 PSMG2Q969U7 264 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 PKNOX2Q96KN3 472 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 PWWP2AQ96N64 755 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 RAB6BQ9NRW1 208 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 DNAJC17Q9NVM6 304 aaKnown RBP22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 A0A0A0MRY4 1105 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 ADH1AP07327 375 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 PPIDQ08752 370 aaKnown RBP22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 MS4A13Q5J8X5 152 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 CEP85LQ5SZL2 805 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 ANKRD22Q5VYY1 191 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 NUGGCQ68CJ6 796 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 CENPUQ71F23 418 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 DNAJB7Q7Z6W7 309 aaPredicted RBP22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 HDAC11Q96DB2 347 aa22.09■■□□□ 1.13
TSPAN3-202ENST00000346495 P2RY11Q96G91 374 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms