RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ATG13O75143 517 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 EIF4BP23588 611 aaKnown RBP11.16□□□□□ -0.62
CLCN6-202ENST00000346436 CNTN1Q12860 1018 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 XRCC4Q13426 336 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 ZPBP2Q6X784 338 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 MAGEC3Q8TD91 643 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 MYLK2Q9H1R3 596 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 DLGAP2Q9P1A6 1054 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PAK5Q9P286 719 aa11.16□□□□□ -0.62
CLCN6-202ENST00000346436 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 CLASP2O75122 1294 aaKnown RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 VPS26AO75436 327 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 PDCD2Q16342 344 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF606Q8WXB4 792 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF518BQ9C0D4 1074 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 MRGBPQ9NV56 204 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 DTNAQ9Y4J8 743 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ITGB5P18084 799 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF135P52742 658 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 USP4Q13107 963 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 UBXN2BQ14CS0 331 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 OTOP3Q7RTS5 596 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 C11orf96Q7Z7L8 435 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 FAM9CQ8IZT9 166 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 LRRC57Q8N9N7 239 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 RXFP1Q9HBX9 757 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 WWOXQ9NZC7 414 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 SRRDQ9UH36 339 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 NCANO14594 1321 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ATP9AO75110 1047 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 SOAT2O75908 522 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 CYP3A4P08684 503 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 KRT16P08779 473 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 MYL2P10916 166 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 RFC2P35250 354 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 TKTL1P51854 596 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 CDH8P55286 799 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 GPM6BQ13491 265 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 IFNL1Q8IU54 200 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF513Q8N8E2 541 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 SEMA4DQ92854 862 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 MKL1Q969V6 931 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 CCDC138Q96M89 665 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 SAMD11Q96NU1 681 aa11.15□□□□□ -0.62
CLCN6-202ENST00000346436 FAM32AQ9Y421 112 aaKnown RBP11.15□□□□□ -0.62
CLCN6-202ENST00000346436 BTNL10A8MVZ5 291 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 RAMP2O60895 175 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 SHOX2O60902 331 aaPredicted RBP11.15□□□□□ -0.63
CLCN6-202ENST00000346436 CCL5P13501 91 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 SERPINA4P29622 427 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 GRSF1Q12849 480 aaKnown RBP eCLIP11.15□□□□□ -0.63
CLCN6-202ENST00000346436 SUZ12Q15022 739 aaKnown RBP11.15□□□□□ -0.63
CLCN6-202ENST00000346436 HYIQ5T013 277 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 EXOC3L1Q86VI1 746 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 ST13P4Q8IZP2 240 aaPredicted RBP11.15□□□□□ -0.63
CLCN6-202ENST00000346436 MYO1HQ8N1T3 1032 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 OR9Q1Q8NGQ5 310 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 LENG9Q96B70 501 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 NSL1Q96IY1 281 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 PGLYRP2Q96PD5 576 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 GAD1Q99259 594 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 AHSPQ9NZD4 102 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 MYH8P13535 1937 aa11.15□□□□□ -0.63
CLCN6-202ENST00000346436 DGKIO75912 1065 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 PBLDP30039 288 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 MARSP56192 900 aaKnown RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 HIC1Q14526 733 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 DUSP28Q4G0W2 176 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 SETMARQ53H47 684 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TEDDM1Q5T9Z0 273 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 PRR23BQ6ZRT6 265 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 MOB2Q70IA6 237 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RIBC1Q8N443 379 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM159Q96B96 161 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 GPR88Q9GZN0 384 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 LRRC32Q14392 662 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 TADA1Q96BN2 335 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CXorf40BQ96DE9 158 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ELMO2Q96JJ3 720 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 KRCC1Q9NPI7 259 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF541Q9H0D2 1346 aa11.14□□□□□ -0.63
CLCN6-202ENST00000346436 CHD2O14647 1828 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms