RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 BOLA2-SMG1P6H3BVE0 249 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 MPOP05164 745 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 NPTX2P47972 431 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 N4BP2Q86UW6 1770 aaPredicted RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 ANXA6P08133 673 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 AMPD1P23109 780 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.185e-7■■■□□ 18.4
TRIO-202ENST00000344204 BMPR2Q13873 1038 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ITIH1P19827 911 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 FAAP100Q0VG06 881 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 AKIRIN2Q53H80 203 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 TYW5A2RUC4 315 aaKnown RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 GTF2H1P32780 548 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 PID1Q7Z2X4 250 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 PIF1Q9H611 641 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 CNTNAP5Q8WYK1 1306 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 GSG1L2A8MUP6 293 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 AVPR1AP37288 418 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 STAT5AP42229 794 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 STAT5BP51692 787 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 PAGE2BQ5JRK9 111 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 PAGE2Q7Z2X7 111 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 CCNT2O60583 730 aaKnown RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 VPS4BO75351 444 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ZMPSTE24O75844 475 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIO-202ENST00000344204 RHAGQ02094 409 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 TADA1Q96BN2 335 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 GNEQ9Y223 722 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 CYP2U1Q7Z449 544 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 SYT15Q9BQS2 421 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 MYO7AQ13402 2215 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 DFFAO00273 331 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 PRPF4O43172 522 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■□□□□ 11.1
TRIO-202ENST00000344204 MSH3P20585 1137 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 UTP15Q8TED0 518 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 MNTQ99583 582 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 RBAKQ9NYW8 714 aaPredicted RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 CCDC154A6NI56 674 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 RPL14P50914 215 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 MTX3Q5HYI7 312 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 TMEM114B3SHH9 223 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 ZIK1Q3SY52 487 aaPredicted RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 MED28Q9H204 178 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 PIDD1Q9HB75 910 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 SALL1Q9NSC2 1324 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 FAM49BQ9NUQ9 324 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 CD274Q9NZQ7 290 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 TRIM38O00635 465 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 HALP42357 657 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 ILF2Q12905 390 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 ADGRE1Q14246 886 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 ZNF276Q8N554 614 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 MYL12AP19105 171 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 PNPT1Q8TCS8 783 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 TAS2R1Q9NYW7 299 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 GLRBP48167 497 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 STARP49675 285 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 POU4F1Q01851 419 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 EMC1Q8N766 993 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 KIFC1Q9BW19 673 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 CDH19Q9H159 772 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
TRIO-202ENST00000344204 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
TRIO-202ENST00000344204 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 TSPAN19P0C672 248 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 BST1Q10588 318 aa13.9□□□□□ -0.18
TRIO-202ENST00000344204 TNFAIP8L3Q5GJ75 292 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms