RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ATP1A1P05023 1023 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TRIM21P19474 475 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PCK1P35558 622 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 OR1G1P47890 313 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 RPL34P49207 117 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 KCNJ2P63252 427 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 GUCA2AQ02747 115 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 DMP1Q13316 513 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 EFHC1Q5JVL4 640 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 LRIG3Q6UXM1 1119 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 DYMQ7RTS9 669 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TMCO2Q7Z6W1 182 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ANKS4BQ8N8V4 417 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 WDR60Q8WVS4 1066 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CTNNBL1Q8WYA6 563 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 RAPGEF5Q92565 580 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PRCCQ92733 491 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 C18orf25Q96B23 403 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TRIM11Q96F44 468 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 MINDY3Q9H8M7 445 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 HPS4Q9NQG7 708 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 AGAP1Q9UPQ3 857 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 N6AMT1Q9Y5N5 214 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 THADAQ6YHU6 1953 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PDE2AO00408 941 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CDX4O14627 284 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SUPT3HO75486 399 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 GNA14O95837 355 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PDHA1P08559 390 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 RARAP10276 462 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 HSD3B2P26439 372 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PEX5P50542 639 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 NCALDP61601 193 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ATP11AP98196 1134 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 GALNTL6Q49A17 601 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 AASDHQ4L235 1098 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 RILPL1Q5EBL4 403 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TANGO2Q6ICL3 276 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 DUS1LQ6P1R4 473 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 C3orf62Q6ZUJ4 267 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 NANOGNBQ7Z5D8 188 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PIGWQ7Z7B1 504 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 C14orf80Q86SX3 495 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PEX5LQ8IYB4 626 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 METTL13Q8N6R0 699 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF579Q8NAF0 562 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CENPTQ96BT3 561 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 KMT5AQ9NQR1 393 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PDP2Q9P2J9 529 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ADAMTS9Q9P2N4 1935 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 A0A0J9YVX5 310 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 EIF4E1BA6NMX2 242 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TMEM110-MUSTN1A8MSY1 372 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PRSS47A8MTI9 375 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PER2O15055 1255 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 LSM1O15116 133 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 HNRNPRO43390 633 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TNFSF14O43557 240 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 JAK2O60674 1132 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 DNAJC6O75061 913 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 RPN1P04843 607 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 PNLIPP16233 465 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ACP1P24666 158 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 GBP1P32455 592 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 MYL7Q01449 175 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SQSTM1Q13501 440 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TOMM20Q15388 145 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 FAM171A1Q5VUB5 890 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 ASRGL1Q7L266 308 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 GRASPQ7Z6J2 395 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CLEC14AQ86T13 490 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 TMEM161BQ8NDZ6 487 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 FLCNQ8NFG4 579 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SLC7A14Q8TBB6 771 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SKA1Q96BD8 255 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 CCDC43Q96MW1 224 aaKnown RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 NR1H4Q96RI1 486 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 NAP1L3Q99457 506 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-202ENST00000343599 SPATA16Q9BXB7 569 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 MIS12Q9H081 205 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 BHMT2Q9H2M3 363 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 POLD4Q9HCU8 107 aa7.6□□□□□ -1.19
ZNF540-202ENST00000343599 LRP4O75096 1905 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 EML1O00423 815 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 HIP1RO75146 1068 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 MARK3P27448 753 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 MSH2P43246 934 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CCT8P50990 548 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 ATP2C1P98194 919 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 YWHAHQ04917 246 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-202ENST00000343599 BIRC3Q13489 604 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 XKR9Q5GH70 373 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 LLGL2Q6P1M3 1020 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 Q6ZNB5 142 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 CNGA4Q8IV77 575 aa7.59□□□□□ -1.19
ZNF540-202ENST00000343599 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms