RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CKAP5Q14008 2032 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 CYP11A1P05108 521 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 CISD3P0C7P0 127 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 HGFP14210 728 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 PFKLP17858 780 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 PRKCHP24723 683 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 UGT1A5P35504 534 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 GUCY2FP51841 1108 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 SPAG1Q07617 926 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 SP5Q6BEB4 398 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-201ENST00000340660 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
ATXN3-201ENST00000340660 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 OTUB2Q96DC9 234 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 KIFC3Q9BVG8 833 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 IL25Q9H293 177 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 THAP10Q9P2Z0 257 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-201ENST00000340660 TNFSF13BQ9Y275 285 aa11.83□□□□□ -0.52
ATXN3-201ENST00000340660 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-201ENST00000340660 TCP11X1B4DZS4 312 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 USO1O60763 962 aaKnown RBP11.82□□□□□ -0.52
ATXN3-201ENST00000340660 RGS9O75916 674 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-201ENST00000340660 CYP2F1P24903 491 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 SLC10A6Q3KNW5 377 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 PPP4R3AQ6IN85 833 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 FAM35AQ86V20 835 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 TP53INP2Q8IXH6 220 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 CROCCQ5TZA2 2017 aa11.82□□□□□ -0.52
ATXN3-201ENST00000340660 ZNF106Q9H2Y7 1883 aaKnown RBP11.81□□□□□ -0.52
ATXN3-201ENST00000340660 CYP3A7-CYP3A51PA0A087WV96 503 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 NEDD8-MDP1E9PL57 170 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 NVLO15381 856 aaKnown RBP11.81□□□□□ -0.52
ATXN3-201ENST00000340660 SASH3O75995 380 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
ATXN3-201ENST00000340660 DGKAP23743 735 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 CYP3A7P24462 503 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 RARRES1P49788 294 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 PDE1AP54750 535 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 LILRA4P59901 499 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 KCNJ12Q14500 433 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 EPHA7Q15375 998 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 OCLNQ16625 522 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 ZNF568Q3ZCX4 644 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 CRTC1Q6UUV9 634 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 TMPRSS9Q7Z410 1059 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 Q8N3U1 123 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 FBXO39Q8N4B4 442 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 OR2T3Q8NH03 318 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 WBP2Q969T9 261 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 C5orf34Q96MH7 638 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 SLKQ9H2G2 1235 aaPredicted RBP11.81□□□□□ -0.52
ATXN3-201ENST00000340660 DOCK9Q9BZ29 2069 aa11.81□□□□□ -0.52
ATXN3-201ENST00000340660 ACANP16112 2415 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 PRAMEF33A0A0G2JMD5 474 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 FAM47DPA6NHR8 397 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 EFCAB7A8K855 629 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 PRAMEF10O60809 474 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 TCEA3O75764 348 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 OAS1P00973 400 aaKnown RBP11.8□□□□□ -0.52
ATXN3-201ENST00000340660 RARAP10276 462 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 TYRP14679 529 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
ATXN3-201ENST00000340660 PCSK7Q16549 785 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 COX20Q5RI15 118 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 PERM1Q5SV97 790 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 GDF7Q7Z4P5 450 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 APBB1IPQ7Z5R6 666 aaPredicted RBP11.8□□□□□ -0.52
ATXN3-201ENST00000340660 TPH2Q8IWU9 490 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 SGK2Q9HBY8 427 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.8□□□□□ -0.52
ATXN3-201ENST00000340660 FOXJ2Q9P0K8 574 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 FRRS1LQ9P0K9 344 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 SLC5A6Q9Y289 635 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 CITO14578 2027 aa11.8□□□□□ -0.52
ATXN3-201ENST00000340660 A0A087WWV3 80 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 ZNF840PA6NDX5 716 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 C10orf142B7Z368 130 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 C9orf172C9J069 976 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 ABLIM1O14639 778 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 SLC37A4O43826 429 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 PRMT3O60678 531 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 EPHX1P07099 455 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 CDH8P55286 799 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 RAC1P63000 192 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 GPLD1P80108 840 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 PLAURQ03405 335 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 SSRP1Q08945 709 aaKnown RBP11.79□□□□□ -0.52
ATXN3-201ENST00000340660 ZNF234Q14588 700 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 GUSBP11Q6P575 273 aa11.79□□□□□ -0.52
ATXN3-201ENST00000340660 SHISA2Q6UWI4 295 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms