RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HSP90AA5PQ58FG0 334 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 OLFML1Q6UWY5 402 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 FRMD7Q6ZUT3 714 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 PLD6Q8N2A8 252 aaKnown RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 GALNT4Q8N4A0 578 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 S100A14Q9HCY8 104 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 PRMT7Q9NVM4 692 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ADAMTS6Q9UKP5 1117 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 INPP5FQ9Y2H2 1132 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 TRPA1O75762 1119 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 AMHP03971 560 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 FGF3P11487 239 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ATP6V1B1P15313 513 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 LMO2P25791 158 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 SULT1E1P49888 294 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 SERPINB9P50453 376 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 IRF9Q00978 393 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF618Q5T7W0 954 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 MYLK4Q86YV6 388 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF781Q8N8C0 355 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 SMARCAD1Q9H4L7 1026 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF180Q9UJW8 692 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 EMCNQ9ULC0 261 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 KLF11O14901 512 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 MFSD11O43934 449 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 PLIN3O60664 434 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 CPA3P15088 417 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 ACAT1P24752 427 aaKnown RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 NUDT2P50583 147 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 WASHC5Q12768 1159 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 DLG1Q12959 904 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 CWF19L1Q69YN2 538 aaKnown RBP14.79□□□□□ -0.04
CPSF7-201ENST00000340437 STRA8Q7Z7C7 330 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 RNF169Q8NCN4 708 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 OR6Y1Q8NGX8 325 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 USP33Q8TEY7 942 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 GATA6Q92908 595 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 SGF29Q96ES7 293 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 GOLGA2P5Q9HBQ8 144 aa14.79□□□□□ -0.04
CPSF7-201ENST00000340437 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CAPN8A6NHC0 703 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 NFKBIEO00221 500 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 ENO3P13929 434 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-201ENST00000340437 ARRB2P32121 409 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 GABRB2P47870 512 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 BTKQ06187 659 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CTU1Q7Z7A3 348 aaKnown RBP14.78□□□□□ -0.04
CPSF7-201ENST00000340437 DHDDSQ86SQ9 333 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 TRIP11Q15643 1979 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 GLRA3O75311 464 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 ENDOD1O94919 500 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CHRM1P11229 460 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-201ENST00000340437 SLC9B1Q4ZJI4 515 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 PPM1LQ5SGD2 360 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 P2RY11Q96G91 374 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 COG4Q9H9E3 785 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 PNPLA8Q9NP80 782 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CLIC5Q9NZA1 410 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 hCG_2014768A0A024R1R8 64 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 MYOCOSA0A1B0GUC4 107 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CLDN5O00501 218 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 IRF6O14896 467 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 HBP1O60381 514 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 GABBR2O75899 941 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 KLHL2O95198 593 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 SERPINE1P05121 402 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 PROZP22891 400 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 EPHA3P29320 983 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 PCLAFQ15004 111 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
CPSF7-201ENST00000340437 MAVSQ7Z434 540 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 DCLK2Q8N568 766 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 CYP3A43Q9HB55 503 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 SLC39A10Q9ULF5 831 aa14.78□□□□□ -0.04
CPSF7-201ENST00000340437 SNNO75324 88 aaPredicted RBP14.77□□□□□ -0.04
CPSF7-201ENST00000340437 DDNO94850 711 aaPredicted RBP14.77□□□□□ -0.04
CPSF7-201ENST00000340437 OR6B1O95007 311 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 SLC9A4Q6AI14 798 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 PTAR1Q7Z6K3 402 aaPredicted RBP14.77□□□□□ -0.04
CPSF7-201ENST00000340437 ST13P4Q8IZP2 240 aaPredicted RBP14.77□□□□□ -0.04
CPSF7-201ENST00000340437 CCNYL1Q8N7R7 359 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 SLC2A14Q8TDB8 520 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 PRDM12Q9H4Q4 367 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 CDH22Q9UJ99 828 aa14.77□□□□□ -0.04
CPSF7-201ENST00000340437 ZNF280AP59817 542 aaPredicted RBP14.77□□□□□ -0.05
CPSF7-201ENST00000340437 ABCE1P61221 599 aaKnown RBP14.77□□□□□ -0.05
CPSF7-201ENST00000340437 TNFAIP2Q03169 654 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 IYDQ6PHW0 289 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 KHSRPQ92945 711 aaKnown RBP eCLIP14.77□□□□□ -0.054e-8■■□□□ 14
CPSF7-201ENST00000340437 F8W8V4 182 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 PHGDHO43175 533 aaKnown RBP14.77□□□□□ -0.05
CPSF7-201ENST00000340437 CHRNGP07510 517 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 MRPS22P82650 360 aaKnown RBP14.77□□□□□ -0.05
CPSF7-201ENST00000340437 AFG1LQ8WV93 481 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 KLHL4Q9C0H6 718 aa14.77□□□□□ -0.05
CPSF7-201ENST00000340437 SNX15Q9NRS6 342 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms