RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CLNKQ7Z7G1 428 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TBC1D1Q86TI0 1168 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FAM149B1Q96BN6 582 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SLC7A6OSQ96CW6 309 aaPredicted RBP11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PCED1BQ96HM7 432 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FAM111AQ96PZ2 611 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 EBF2Q9HAK2 575 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 FNIP2Q9P278 1114 aa11.03□□□□□ -0.64
TRAF3IP2-201ENST00000340026 AP2A1O95782 977 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 LTFP02788 710 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SERPINB6P35237 376 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 MAPRE1Q15691 268 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TEX44Q53QW1 395 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SYPL2Q5VXT5 272 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 LENG1Q96BZ8 264 aaPredicted RBP11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 TSGA13Q96PP4 275 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PPP1R2P1Q96PQ5 205 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 ULBP1Q9BZM6 244 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 IQCGQ9H095 443 aaKnown RBP11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 PRDM12Q9H4Q4 367 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 CASS4Q9NQ75 786 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 SORCS3Q9UPU3 1222 aa11.02□□□□□ -0.64
TRAF3IP2-201ENST00000340026 NRP1O14786 923 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 PSMD3O43242 534 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 AP1G2O75843 785 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 KRT16P08779 473 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 SLC10A3P09131 477 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ODC1P11926 461 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 DNAJB1P25685 340 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 PTPN4P29074 926 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 NRG1Q02297 640 aaPredicted RBP11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TBCCQ15814 346 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 FAXCQ5TGI0 409 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 DCLRE1AQ6PJP8 1040 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 AGMOQ6ZNB7 445 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TMEM135Q86UB9 458 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ZNF567Q8N184 647 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MPP5Q8N3R9 675 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 STON2Q8WXE9 905 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ZFP42Q96MM3 310 aa11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TDRD15B5MCY1 1934 aaKnown RBP11.02□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ARL5CA6NH57 179 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 YJEFN3A6XGL0 299 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 E7ENQ6 273 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CLDN5O00501 218 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 GLRA3O75311 464 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CHRNA1P02708 482 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 BPGMP07738 259 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ERCC2P18074 760 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TYMPP19971 482 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 HUNKP57058 714 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MAP3K7CLP57077 242 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 GRIK3Q13003 919 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CRYMQ14894 314 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ZNF638Q14966 1978 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 GPR162Q16538 588 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TRMT10BQ6PF06 316 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CDHR3Q6ZTQ4 885 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 LCA5Q86VQ0 697 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CTAGE3PQ8IX95 158 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 RNF169Q8NCN4 708 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MRRFQ96E11 262 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 LGMNQ99538 433 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 RTP3Q9BQQ7 232 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 GBA3Q9H227 469 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MMADHCQ9H3L0 296 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 FAM96AQ9H5X1 160 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 DCDC2Q9UHG0 476 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 USP1O94782 785 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 POLBP06746 335 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MLH1P40692 756 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 NDUFV1P49821 464 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CLCNKBP51801 687 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ARFIP2P53365 341 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 PITX1P78337 314 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 WASHC2DQ5SRD0 308 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 GRTP1Q5TC63 336 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ITPRIPL1Q6GPH6 555 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 PACS1Q6VY07 963 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 DENND5BQ6ZUT9 1274 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 TAB3Q8N5C8 712 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ZSCAN18Q8TBC5 510 aaPredicted RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 FATE1Q969F0 183 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 UTP4Q969X6 686 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 PTCD3Q96EY7 689 aaKnown RBP11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 EPAS1Q99814 870 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 CPNE1Q99829 537 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MCMBPQ9BTE3 642 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 MED10Q9BTT4 135 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 LRRC40Q9H9A6 602 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
TRAF3IP2-201ENST00000340026 ARHGEF38Q9NXL2 777 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms