RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 UGT1A3P35503 534 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 UGT1A5P35504 534 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 SERPINB5P36952 375 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 SERPINB9P50453 376 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 ATXN3P54252 364 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-201ENST00000339754 DPYSQ14117 519 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 ABCB5Q2M3G0 1257 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 SNRNP48Q6IEG0 339 aaKnown RBP9.65□□□□□ -0.86
NECAP1-201ENST00000339754 NPNTQ6UXI9 565 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 SP8Q8IXZ3 490 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 WDTC1Q8N5D0 677 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 RNF148Q8N7C7 305 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 DOK1Q99704 481 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 SLC29A1Q99808 456 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 EIF2AQ9BY44 585 aaKnown RBP9.65□□□□□ -0.86
NECAP1-201ENST00000339754 RPF2Q9H7B2 306 aaKnown RBP9.65□□□□□ -0.86
NECAP1-201ENST00000339754 TRPC7Q9HCX4 862 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
NECAP1-201ENST00000339754 CCDC162PA2VCL2 907 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 TRIM64BA6NI03 449 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 MCF2LO15068 1137 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 SPTLC1O15269 473 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 ALDOAP04075 364 aaKnown RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 OSBPP22059 807 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 ME2P23368 584 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 BMXP51813 675 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 RPS3AP61247 264 aaKnown RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 TAP1Q03518 808 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 SPP2Q13103 211 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 ATP1A4Q13733 1029 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 PDE1CQ14123 709 aaPredicted RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 DARS2Q6PI48 645 aaKnown RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 SNX32Q86XE0 403 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 RFX6Q8HWS3 928 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 MYO1HQ8N1T3 1032 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 USP13Q92995 863 aaPredicted RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 OR52B2Q96RD2 323 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 SEMA6AQ9H2E6 1030 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 TUBA8Q9NY65 449 aaPredicted RBP9.65□□□□□ -0.87
NECAP1-201ENST00000339754 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.87
NECAP1-201ENST00000339754 PTPRJQ12913 1337 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FAM155AB1AL88 458 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 H3BMQ9 156 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 STX16-NPEPL1H3BU86 382 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CFLARO15519 480 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 DHX15O43143 795 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 KRT7P08729 469 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NFKBIAP25963 317 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 EIF2B2P49770 351 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ESRRGP62508 458 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ROR1Q01973 937 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CNTN2Q02246 1040 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 TAF5Q15542 800 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 MOGQ16653 247 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FAM102BQ5T8I3 360 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 DEPDC1Q5TB30 811 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FAXCQ5TGI0 409 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NEPROQ6NW34 567 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 GMCL1P1Q8NEA9 526 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CMASQ8NFW8 434 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CASP10Q92851 521 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ATP2A3Q93084 1043 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ATP6V1E2Q96A05 226 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 SIGLEC10Q96LC7 697 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 COG8Q96MW5 612 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ACO2Q99798 780 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FERMT1Q9BQL6 677 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ANKRD60Q9BZ19 345 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FRMD8Q9BZ67 464 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 PRDM16Q9HAZ2 1276 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ANLNQ9NQW6 1124 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NCKIPSDQ9NZQ3 722 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 TSC22D4Q9Y3Q8 395 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CROCCQ5TZA2 2017 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 GLRA3O75311 464 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 LYPLA2O95372 231 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ERBB2P04626 1255 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 RALBP11234 206 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ITGB5P18084 799 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 PSMA2P25787 234 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 YWHABP31946 246 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 QARSP47897 775 aaKnown RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 ZNF132P52740 706 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NFIAQ12857 509 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NOMO1Q15155 1222 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CLPPQ16740 277 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-201ENST00000339754 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 NHSL2Q5HYW2 709 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 FGD3Q5JSP0 725 aa9.64□□□□□ -0.87
NECAP1-201ENST00000339754 CYP4A22Q5TCH4 519 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms