RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF317Q96PQ6 595 aaPredicted RBP7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 GORASP1Q9BQQ3 440 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 FTHL17Q9BXU8 183 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 FOXP3Q9BZS1 431 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 GRID1Q9ULK0 1009 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 PTPRDP23468 1912 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 SHROOM3Q8TF72 1996 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 C5orf60A6NFR6 353 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ZNF487B1APH4 448 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 PAGE1O75459 146 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 IGLV3-25P01717 112 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ABHD2P08910 425 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ZFXP17010 805 aaPredicted RBP7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 KRT15P19012 456 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ZBTB17Q13105 803 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 XRCC4Q13426 336 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 PRKD1Q15139 912 aaPredicted RBP7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 RASIP1Q5U651 963 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 BTBD8Q5XKL5 378 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 FUT10Q6P4F1 479 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC39A5Q6ZMH5 540 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ARHGEF18Q6ZSZ5 1173 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 MICALCLQ6ZW33 695 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 PID1Q7Z2X4 250 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 TRABD2AQ86V40 505 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 LRRC34Q8IZ02 419 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 VPS52Q8N1B4 723 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 SIGLEC10Q96LC7 697 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC9A7Q96T83 725 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 PAFAH2Q99487 392 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 NCAPGQ9BPX3 1015 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 VN1R3Q9BXE9 311 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 KLC2Q9H0B6 622 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 GMIPQ9P107 970 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 KANSL3Q9P2N6 904 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 LGALS13Q9UHV8 139 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 NEU3Q9UQ49 428 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 MAD1L1Q9Y6D9 718 aa7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 SPTBN5Q9NRC6 3674 aaKnown RBP7.62□□□□□ -1.19
SRFBP1-201ENST00000339397 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 IRAK2O43187 625 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 HMBSP08397 361 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CPB1P15086 417 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 RPA3P35244 121 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SESN2P58004 480 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SCAPQ12770 1279 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MRPL58Q14197 206 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PAFAH1B3Q15102 231 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MAPRE1Q15691 268 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MGAT5BQ3V5L5 792 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 C4orf50Q6ZRC1 276 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MIB1Q86YT6 1006 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CDKL3Q8IVW4 592 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ATP11CQ8NB49 1132 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 USP33Q8TEY7 942 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 NTAN1Q96AB6 310 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 FCRL2Q96LA5 508 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TTC25Q96NG3 672 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SEPT5Q99719 369 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PAIP2Q9BPZ3 127 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 APOL2Q9BQE5 337 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CCDC77Q9BR77 488 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 OGDHLQ9ULD0 1010 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 A0A0A0MRY4 1105 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 WDR27A2RRH5 827 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TMEM189-UBE2V1I3L0A0 370 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PITPNM1O00562 1244 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 FAM107AO95990 144 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 KRT4P19013 534 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PTPN3P26045 913 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 GEMIN4P57678 1058 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 UNC5AQ6ZN44 842 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 OTOP3Q7RTS5 596 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TADA2BQ86TJ2 420 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 PSTKQ8IV42 348 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 NUP93Q8N1F7 819 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 DCAKDQ8WVC6 231 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SEPT8Q92599 483 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MYEOVQ96EZ4 313 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 SPATA13Q96N96 652 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TRABDQ9H4I3 376 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ACSS3Q9H6R3 686 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ABCC13Q9NSE7 274 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 RCOR3Q9P2K3 495 aaPredicted RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ZC3H7BQ9UGR2 993 aaKnown RBP7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 ATP11BQ9Y2G3 1177 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CDY1Q9Y6F8 540 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 CFAP69A5D8W1 941 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 STK25O00506 426 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 JCHAINP01591 159 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 DRD4P21917 467 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 GMPRP36959 345 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 MAGEA3P43357 314 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 EFEMP1Q12805 493 aa7.61□□□□□ -1.19
SRFBP1-201ENST00000339397 TAF10Q12962 218 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms