RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 RPS14P62263 151 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 BNC1Q01954 994 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 RING1Q06587 406 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 SEMA3BQ13214 749 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 MS4A13Q5J8X5 152 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 PIP4P1Q86T03 277 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 APCDD1Q8J025 514 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 DEFB106AQ8N104 65 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 FIBINQ8TAL6 211 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CEP76Q8TAP6 659 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 MYO19Q96H55 970 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CPXM1Q96SM3 734 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 C6orf106Q9H6K1 298 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 IL21RQ9HBE5 538 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 PLCB1Q9NQ66 1216 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 COX16Q9P0S2 106 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 EIF2B4Q9UI10 523 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 SLCO3A1Q9UIG8 710 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 TLR6Q9Y2C9 796 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CACNA1EQ15878 2313 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 KCNK3O14649 394 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 CAPN9O14815 690 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 NPC1O15118 1278 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 SH3BP5O60239 455 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 TRUB2O95900 331 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 DLDP09622 509 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 ACADMP11310 421 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 CLCN1P35523 988 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 CSKP41240 450 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 ACADSBP45954 432 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 YWHAZP63104 245 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 CIR1Q86X95 450 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 MFN1Q8IWA4 741 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 ZCCHC9Q8N567 271 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 DNASE2BQ8WZ79 361 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 MRGPRX3Q96LB0 322 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 CHD8Q9HCK8 2581 aa13.86□□□□□ -0.19
NUDCD3-201ENST00000338427 PCDH15Q96QU1 1955 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 CKAP5Q14008 2032 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 MEI4A8MW99 385 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 TTC34A8MYJ7 566 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 C1QTNF9BB2RNN3 333 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 MED7O43513 233 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 OPHN1O60890 802 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SIN3BO75182 1162 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 C1QTNF9P0C862 333 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 TACR2P21452 398 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 KCNMA1Q12791 1236 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 PDCLQ13371 301 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 EIF4EBP2Q13542 120 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 DPCR1Q3MIW9 517 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SYCP2LQ5T4T6 812 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SLC47A2Q86VL8 602 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 DHX40Q8IX18 779 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 AHI1Q8N157 1196 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 MLKLQ8NB16 471 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 HJURPQ8NCD3 748 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SHC3Q92529 594 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 FOXJ1Q92949 421 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 TTC17Q96AE7 1141 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 RPL10LQ96L21 214 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SERPINB11Q96P15 392 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 LHX5Q9H2C1 402 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 CLSTN2Q9H4D0 955 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 THAP9Q9H5L6 903 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 SAMSN1Q9NSI8 373 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 APEX2Q9UBZ4 518 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 MAP1BP46821 2468 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 KNL1Q8NG31 2342 aa13.85□□□□□ -0.19
NUDCD3-201ENST00000338427 FRYQ5TBA9 3013 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 GJB3O75712 270 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 IGLV3-19P01714 112 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 IGLV3-25P01717 112 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 ERBB2P04626 1255 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 ATP5BP06576 529 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 OXTRP30559 389 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 HOXD12P35452 270 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 GGCXP38435 758 aa13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 CSNK1EP49674 416 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-201ENST00000338427 IRAK1P51617 712 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms