RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SCN4BQ8IWT1 228 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 OR10T2Q8NGX3 314 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 SPATA22Q8NHS9 363 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 FBXO27Q8NI29 283 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 OXNAD1Q96HP4 312 aaPredicted RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 HNRNPABQ99729 332 aaKnown RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 EBNA1BP2Q99848 306 aaKnown RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 ADAM2Q99965 735 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 TMEM120AQ9BXJ8 343 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 NDFIP2Q9NV92 336 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
SNCA-201ENST00000336904 DERAQ9Y315 318 aa9.11□□□□□ -0.95
SNCA-201ENST00000336904 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TPP1O14773 563 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 DNAJC6O75061 913 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ZWINTO95229 277 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 T-ENOLP0DO92 83 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 BST1Q10588 318 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SETDB1Q15047 1291 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 NOMO2Q5JPE7 1267 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TTC39BQ5VTQ0 682 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 RFWD3Q6PCD5 774 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 C17orf99Q6UX52 265 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SPATA6LQ8N4H0 392 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SHKBP1Q8TBC3 707 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 MFSD3Q96ES6 412 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 FCRL3Q96P31 734 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 NPY6RQ99463 290 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 RTP3Q9BQQ7 232 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ARL8BQ9NVJ2 186 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 NOD1Q9Y239 953 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SLC45A1Q9Y2W3 748 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 C9IYK1 514 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 MT-CYBP00156 380 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 AKR1A1P14550 325 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 NEK3P51956 506 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 GJA9P57773 515 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SESN3P58005 492 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 DAOAP59103 153 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ATG14Q6ZNE5 492 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TAC4Q86UU9 113 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TTC9BQ8N6N2 239 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 TTC8Q8TAM2 541 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 APBA2Q99767 749 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 OXCT2Q9BYC2 517 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 VPS11Q9H270 941 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 MPP6Q9NZW5 540 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 STARD13Q9Y3M8 1113 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 RPS6KL1Q9Y6S9 549 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 XPOTO43592 962 aaKnown RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 ITM2AO43736 263 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 DGKIO75912 1065 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 JCHAINP01591 159 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 LTFP02788 710 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SNRPAP09012 282 aaKnown RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 NOS2P35228 1153 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ADRA1BP35368 520 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 AVPR1AP37288 418 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ETV4P43268 484 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 KCNA10Q16322 511 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 IL31Q6EBC2 164 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 SH2D5Q6ZV89 423 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 RASSF3Q86WH2 238 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 GSDMBQ8TAX9 411 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 ZNF419Q96HQ0 510 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 GORASP1Q9BQQ3 440 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 EBF4Q9BQW3 602 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 FRMD8P1Q9BZ68 369 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 WDR6Q9NNW5 1121 aaKnown RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 NKX1-2Q9UD57 310 aaPredicted RBP9.1□□□□□ -0.95
SNCA-201ENST00000336904 OR12D3Q9UGF7 316 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 GTF2IRD1Q9UHL9 959 aa9.1□□□□□ -0.95
SNCA-201ENST00000336904 H3BRJ5 948 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 ENTPD5O75356 428 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 DAB1O75553 588 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 GCATO75600 419 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 KRT37O76014 449 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 LRIG2O94898 1065 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 UNC5CO95185 931 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 HMBSP08397 361 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 NFKB1P19838 968 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 WARSP23381 471 aaKnown RBP9.09□□□□□ -0.95
SNCA-201ENST00000336904 PNPLA4P41247 253 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 CCR10P46092 362 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 IRF9Q00978 393 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 PEX6Q13608 980 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 HSP90AA5PQ58FG0 334 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 VWA5B1Q5TIE3 1220 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 FYB2Q5VWT5 728 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 RSPH3Q86UC2 560 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 SAPCD2Q86UD0 394 aa9.09□□□□□ -0.95
SNCA-201ENST00000336904 LONP2Q86WA8 852 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms