RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PDE12Q6L8Q7 609 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 ACAD11Q709F0 780 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 NUDCD3Q8IVD9 361 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 NOA1Q8NC60 698 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 N4BP2L2Q92802 583 aaPredicted RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 NCKAP1Q9Y2A7 1128 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 TRPM7Q96QT4 1865 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 VNN1O95497 513 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 CYP2A6P11509 494 aaPredicted RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 GFAPP14136 432 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 GPM6BQ13491 265 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 IMPG1Q17R60 797 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 RAP1GAP2Q684P5 730 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 TRIM55Q9BYV6 548 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 UPF3AQ9H1J1 476 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 ERVK-5Q9HDB9 667 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 IL23AQ9NPF7 189 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 APOA4P06727 396 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 RPL7AP62424 266 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 GPR158Q5T848 1215 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 ZC3H3Q8IXZ2 948 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 TMEM192Q8IY95 271 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 RNF157Q96PX1 679 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 GMIPQ9P107 970 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 AFF4Q9UHB7 1163 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 EFR3BQ9Y2G0 817 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
FNDC3B-201ENST00000336824 TBC1D3BA6NDS4 549 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 CALCAP01258 141 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 SERPINA4P29622 427 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 HADHAP40939 763 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 BCL2L1Q07817 233 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 SUSD6Q92537 303 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 TRABDQ9H4I3 376 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 RABEP2Q9H5N1 569 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 MYADML2A6NDP7 307 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 TBL1XO60907 577 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ITGALP20701 1170 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 CARSP49589 748 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ATAD1Q8NBU5 361 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ARNTL2Q8WYA1 636 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PLD4Q96BZ4 506 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 LATS2Q9NRM7 1088 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 FAM153AQ9UHL3 310 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 DNPEPQ9ULA0 475 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PTPRJQ12913 1337 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 GJB6O95452 261 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 NPY2RP49146 381 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 IRX4P78413 519 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 TPGS1Q6ZTW0 290 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 CPA6Q8N4T0 437 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 MAML1Q92585 1016 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 TTYH3Q9C0H2 523 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 GPR88Q9GZN0 384 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 GJD2Q9UKL4 321 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 TMEM191CA6NGB0 347 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 CCL16O15467 120 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PHEXP78562 749 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 SOWAHAQ2M3V2 549 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 HOMEZQ8IX15 550 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 MAB21L3Q8N8X9 362 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 CXorf38Q8TB03 319 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 SERPINB12Q96P63 405 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ZBTB18Q99592 522 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 FICDQ9BVA6 458 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 BCO2Q9BYV7 579 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ABCF3Q9NUQ8 709 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 NAALADL1Q9UQQ1 740 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 MBLAC1A4D2B0 266 aaPredicted RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ENPP3O14638 875 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ITGAVP06756 1048 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 DDX6P26196 483 aaKnown RBP eCLIP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 XRCC4Q13426 336 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 B3GNT9Q6UX72 402 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 USP45Q70EL2 814 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 DCTN3O75935 186 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 AGBL2Q5U5Z8 902 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 HNRNPLLQ8WVV9 542 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PABPC3Q9H361 631 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 APOBEC3GQ9HC16 384 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 GTSE1Q9NYZ3 720 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 FIS1Q9Y3D6 152 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 MYBPHLA2RUH7 354 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 THEMIS2Q5TEJ8 643 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 FAXCQ5TGI0 409 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 SDHAF4Q5VUM1 108 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 KREMEN2Q8NCW0 462 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ZCCHC2Q9C0B9 1178 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 VCXQ9H320 206 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 RAD18Q9NS91 495 aa9.55□□□□□ -0.88
FNDC3B-201ENST00000336824 ZNF212Q9UDV6 495 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms