RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PHACTR4Q8IZ21 702 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CHORDC1Q9UHD1 332 aaPredicted RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 IQGAP3Q86VI3 1631 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 JCHAINP01591 159 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ALADP13716 330 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ZNF720Q7Z2F6 126 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 TMEM132CQ8N3T6 1108 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ATG4AQ8WYN0 398 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 RORBQ92753 470 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 SLC25A23Q9BV35 468 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 BGNP21810 368 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PAICSP22234 425 aaKnown RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 CYP2F1P24903 491 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 SLC1A6P48664 564 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 GRIK3Q13003 919 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 KCTD21Q4G0X4 260 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ULK2Q8IYT8 1036 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 FBXO25Q8TCJ0 367 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 PANX3Q96QZ0 392 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 GLI2P10070 1586 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ECDO95905 644 aaPredicted RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 STX4Q12846 297 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 MFSD4BQ5TF39 518 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 RBM43Q6ZSC3 357 aaKnown RBP13.37□□□□□ -0.27
HLCS-201ENST00000336648 RXFP2Q8WXD0 754 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 SHCBP1LQ9BZQ2 653 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 NEK6Q9HC98 313 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 ATP6V1HQ9UI12 483 aa13.37□□□□□ -0.27
HLCS-201ENST00000336648 SLC12A8A0AV02 714 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 SLC2A4P14672 509 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 MYL12AP19105 171 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 THPOP40225 353 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 KYAT3Q6YP21 454 aaKnown RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 MYRFQ9Y2G1 1151 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PPP2R3BQ9Y5P8 575 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 A0A087X1B8 175 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 A0A088AWK7 358 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 SLC37A4O43826 429 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ZNF10P21506 573 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 RRM1P23921 792 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PPIL2Q13356 520 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PEG10Q86TG7 708 aaKnown RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 FBXO39Q8N4B4 442 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 DNERQ8NFT8 737 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PPP1R14BQ96C90 147 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 CCDC3Q9BQI4 270 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ADI1Q9BV57 179 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 DCLK3Q9C098 648 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 RMI1Q9H9A7 625 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 RAD18Q9NS91 495 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 MED24O75448 989 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ATP6V1G2O95670 118 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 CKMP06732 381 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 GLRBP48167 497 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 MIER2Q8N344 545 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 AADATQ8N5Z0 425 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 DEFB129Q9H1M3 183 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 EPB41L4BQ9H329 900 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 CYP4F12Q9HCS2 524 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 DCDC2CA8MYV0 355 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 BAIAP3O94812 1187 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 AXLP30530 894 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 CDKAL1Q5VV42 579 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ZNF614Q8N883 585 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 MAGEB10Q96LZ2 347 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 A0A087WXM4 84 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 RIPK2O43353 540 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 PAEPP09466 180 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 OR56A5P0C7T3 313 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ME2P23368 584 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 GCNT1Q02742 428 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 VPS72Q15906 364 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 MCOLN3Q8TDD5 553 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
HLCS-201ENST00000336648 COMMD9Q9P000 198 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 NAALADL1Q9UQQ1 740 aa13.36□□□□□ -0.27
HLCS-201ENST00000336648 A0A087WZ62 844 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms