RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TMA16Q96EY4 203 aaKnown RBP14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 PRICKLE1Q96MT3 831 aaPredicted RBP14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 BBS2Q9BXC9 721 aa14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 TRMT1Q9NXH9 659 aaKnown RBP14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 PLK2Q9NYY3 685 aa14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 MARK1Q9P0L2 795 aa14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 OR12D3Q9UGF7 316 aa14.56□□□□□ -0.08
APOBEC3B-202ENST00000335760 E9PAM4 449 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 HOXC11O43248 304 aaPredicted RBP14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 TBL1XO60907 577 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 SRGAP2O75044 1071 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 PALMO75781 387 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 RARAP10276 462 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 TNNT1P13805 278 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 GJA4P35212 333 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 SOX9P48436 509 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 CA9Q16790 459 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 BOLA3Q53S33 107 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 RABGAP1LQ5R372 815 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 IER5LQ5T953 404 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 FYB2Q5VWT5 728 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 PSTKQ8IV42 348 aaKnown RBP14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 HJURPQ8NCD3 748 aaPredicted RBP14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 KIAA1524Q8TCG1 905 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 TEKT4Q8WW24 435 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 IGSF8Q969P0 613 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 P2RY11Q96G91 374 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 RPRD1AQ96P16 312 aaPredicted RBP14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 IRX2Q9BZI1 471 aaPredicted RBP14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 HEBP1Q9NRV9 189 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 STIM2Q9P246 746 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 CAPN6Q9Y6Q1 641 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 MYOFQ9NZM1 2061 aa14.55□□□□□ -0.08
APOBEC3B-202ENST00000335760 COL4A2P08572 1712 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 TYW5A2RUC4 315 aaKnown RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 FAM72CH0Y354 149 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 PENKP01210 267 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 KRT7P08729 469 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 TYRP14679 529 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 L1CAMP32004 1257 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 RPS24P62847 133 aaKnown RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 NRG1Q02297 640 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 ATP13A4Q4VNC1 1196 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 SLC44A4Q53GD3 710 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 FAM72AQ5TYM5 149 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 FAM72DQ6L9T8 149 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 FAM72BQ86X60 149 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 CIR1Q86X95 450 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 REXO1L1PQ8IX06 675 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 RHOT1Q8IXI2 618 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 ZNF683Q8IZ20 524 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 NAT16Q8N8M0 369 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 LRRC57Q8N9N7 239 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 KCTD15Q96SI1 283 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 C8orf33Q9H7E9 229 aaPredicted RBP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 FBXL21Q9UKT6 434 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 CA14Q9ULX7 337 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 PIAS3Q9Y6X2 628 aa14.54□□□□□ -0.08
APOBEC3B-202ENST00000335760 DRGXA6NNA5 263 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 SPECC1L-ADORA2AF8WAN1 911 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 CREB3O43889 395 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 HOXD9P28356 352 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 IRAK1P51617 712 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 ZXDAP98168 799 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 KRT81Q14533 505 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 GAB4Q2WGN9 574 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 C5orf22Q49AR2 442 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 PPP6R3Q5H9R7 873 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 ZFYVE27Q5T4F4 411 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 TTC39BQ5VTQ0 682 aaPredicted RBP14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 RWDD4Q6NW29 188 aaKnown RBP14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 POLNQ7Z5Q5 900 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 SYCE1Q8N0S2 351 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 TBC1D31Q96DN5 1066 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 XPO6Q96QU8 1125 aaKnown RBP14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 EPAS1Q99814 870 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 KLHL11Q9NVR0 708 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 WNT16Q9UBV4 365 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 COL4A3Q01955 1670 aa14.53□□□□□ -0.08
APOBEC3B-202ENST00000335760 USP27XA6NNY8 438 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 CACNG3O60359 315 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 CNTN5O94779 1100 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 LRIG2O94898 1065 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 FTCDO95954 541 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 GLULP15104 373 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 CTHP32929 405 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 SLC6A11P48066 632 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 CDH6P55285 790 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 AMPD2Q01433 879 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 SEMA3BQ13214 749 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 MLF2Q15773 248 aaPredicted RBP14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 DPYSL2Q16555 572 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 MPP7Q5T2T1 576 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 ARTNQ5T4W7 220 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 MANEALQ5VSG8 457 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 LRRC38Q5VT99 294 aa14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 NAIF1Q69YI7 327 aaPredicted RBP14.52□□□□□ -0.08
APOBEC3B-202ENST00000335760 TPRG1Q6ZUI0 275 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms