RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CYP4F3Q08477 520 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 HLFQ16534 295 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 SLC45A4Q5BKX6 768 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 MMP19Q99542 508 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 OSBPL6Q9BZF3 934 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PNPLA3Q9NST1 481 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
COL4A6-201ENST00000334504 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
COL4A6-201ENST00000334504 FAM237BA0A1B0GVD1 139 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NELFEP18615 380 aaKnown RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 LPIN1Q14693 890 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NEK5Q6P3R8 708 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NT5DC3Q86UY8 548 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF540Q8NDQ6 660 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MAGEB10Q96LZ2 347 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 POMKQ9H5K3 350 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PSIP1O75475 530 aaKnown RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PRLP01236 227 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MAGP20916 626 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 GRIA3P42263 894 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PTAR1Q7Z6K3 402 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 GATAD2AQ86YP4 633 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 TMEM132CQ8N3T6 1108 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 COLGALT1Q8NBJ5 622 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SLC20A1Q8WUM9 679 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 EEF1AKMT1Q8WVE0 214 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PGM2Q96G03 612 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 WDCPQ9H6R7 721 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SLC12A4Q9UP95 1085 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 DRG1Q9Y295 367 aaKnown RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 TFECO14948 347 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 CDC40O60508 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PTGS2P35354 604 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 CARTPTQ16568 116 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 INO80DQ53TQ3 878 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 XKR3Q5GH77 459 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MFSD14CQ5VZR4 134 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 COMMD2Q86X83 199 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 ADHFE1Q8IWW8 467 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NEDD1Q8NHV4 660 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 COX4I2Q96KJ9 171 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 GANQ9H2C0 597 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 EPB41L4BQ9H329 900 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 HAT1O14929 419 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 HSF2Q03933 536 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SCARF1Q14162 830 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 CBWD2Q8IUF1 395 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 FAM126BQ8IXS8 530 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SLC5A5Q92911 643 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MNTQ99583 582 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NAT9Q9BTE0 207 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SLC25A23Q9BV35 468 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 REEP1Q9H902 201 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PCDH9Q9HC56 1237 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SH3BP4Q9P0V3 963 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 VANGL2Q9ULK5 521 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SLC9A8Q9Y2E8 581 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PNPLA7Q6ZV29 1317 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 TBX3O15119 743 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 STX11O75558 287 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 GUCA1AP43080 201 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 NEK3P51956 506 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 RHAGQ02094 409 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MAD2L1Q13257 205 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 FNBP1LQ5T0N5 605 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 LIN54Q6MZP7 749 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 TTLL6Q8N841 843 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MYLPFQ96A32 169 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 DGCR14Q96DF8 476 aaKnown RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MTMR8Q96EF0 704 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SEPT5Q99719 369 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-201ENST00000334504 SENP2Q9HC62 589 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
COL4A6-201ENST00000334504 PROSCO94903 275 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ZBTB11O95625 1053 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 PBLDP30039 288 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 RCVRNP35243 200 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 PRKAA2P54646 552 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CAMK2GQ13555 558 aaPredicted RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 PLCL1Q15111 1095 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SV2CQ496J9 727 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 ATF7IP2Q5U623 682 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 OLFML2AQ68BL7 652 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 SLCO6A1Q86UG4 719 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 TMC2Q8TDI7 906 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CLK4Q9HAZ1 481 aaKnown RBP10□□□□□ -0.81
COL4A6-201ENST00000334504 PHF11Q9UIL8 331 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 INVSQ9Y283 1065 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 CARD8Q9Y2G2 431 aa10□□□□□ -0.81
COL4A6-201ENST00000334504 GMPPBQ9Y5P6 360 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms