RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 MLH1P40692 756 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 MAGEA3P43357 314 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PPP2R5DQ14738 602 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 DBN1Q16643 649 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CES3Q6UWW8 571 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZNF534Q76KX8 674 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TREML1Q86YW5 311 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZNF669Q96BR6 464 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 YIPF3Q9GZM5 350 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 LCTP09848 1927 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TBX10O75333 385 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 LYPLA1O75608 230 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ERVK-10P10266 1014 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 NOS2P35228 1153 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SPRP35270 261 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 UBAP2LQ14157 1087 aaKnown RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CRYBG2Q8N1P7 616 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 NDRG1Q92597 394 aaKnown RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 STRNO43815 780 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TM7SF2O76062 418 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 HSPA4LO95757 839 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 C1QAP02745 245 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RALBP11234 206 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 VAV1P15498 845 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 COPAP53621 1224 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 FAM91A1Q658Y4 838 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CYS1Q717R9 158 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PSTKQ8IV42 348 aaKnown RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 B3GALNT2Q8NCR0 500 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 EBF4Q9BQW3 602 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 MTMR10Q9NXD2 777 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 F8W8V4 182 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PLIN3O60664 434 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 EPHB1P54762 984 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TPI1P60174 286 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CDK18Q07002 472 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ARL13BQ3SXY8 428 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TEX44Q53QW1 395 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 NET1Q7Z628 596 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CERS2Q96G23 380 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CXCL16Q9H2A7 254 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SYBUQ9NX95 663 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 FZD10Q9ULW2 581 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ATP9BO43861 1147 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 MMP3P08254 477 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PPP1R13LQ8WUF5 828 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RNF34Q969K3 372 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CMTM5Q96DZ9 223 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CYP4F11Q9HBI6 524 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 EIF2B3Q9NR50 452 aaKnown RBP12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 DLGAP2Q9P1A6 1054 aa12.01□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CPA3P15088 417 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SAT1P21673 171 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RAP1GDS1P52306 607 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ITGA9Q13797 1035 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 SPANXN3Q5MJ09 141 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 STXBP5Q5T5C0 1151 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 IRGCQ6NXR0 463 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RIPOR1Q6ZS17 1223 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 RAPH1Q70E73 1250 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 C10orf107Q8IVU9 208 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CLPTM1LQ96KA5 538 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CPNE1Q99829 537 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PLAC1Q9HBJ0 212 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 IL1RAPL1Q9NZN1 696 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 MEI4A8MW99 385 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 USP12O75317 370 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 GABBR2O75899 941 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ALDOAP04075 364 aaKnown RBP12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 NPR3P17342 541 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 ABL2P42684 1182 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 CBLBQ13191 982 aa12□□□□□ -0.49
CSPG4P4Y-201ENST00000333235 PCBP1Q15365 356 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms