RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SEMA3BQ13214 749 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 TAF1CQ15572 869 aaPredicted RBP14.98□□□□□ -0.01
TPM3-206ENST00000330188 RAB41Q5JT25 222 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 CASC4Q6P4E1 433 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 TMEM86AQ8N2M4 240 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 ADAM32Q8TC27 787 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 PCED1BQ96HM7 432 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 GAD1Q99259 594 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 FERMT1Q9BQL6 677 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 IGSF9Q9P2J2 1179 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 SLC17A6Q9P2U8 582 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 ST3GAL5Q9UNP4 418 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
TPM3-206ENST00000330188 TRPV2Q9Y5S1 764 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 CAPN9O14815 690 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 HAUS5O94927 633 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 AMHP03971 560 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 THP07101 528 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 ERCC2P18074 760 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 PGAM1P18669 254 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 PTPN4P29074 926 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 SERPINB3P29508 390 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 CACNA2D1P54289 1103 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 BST1Q10588 318 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 SCAPQ12770 1279 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 TEX44Q53QW1 395 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
TPM3-206ENST00000330188 C3orf58Q8NDZ4 430 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 LPPQ93052 612 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 E2F7Q96AV8 911 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 C7orf26Q96N11 449 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 KCNK16Q96T55 309 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 APBA2Q99767 749 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 EBF2Q9HAK2 575 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 CNGB3Q9NQW8 809 aa14.98□□□□□ -0.01
TPM3-206ENST00000330188 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 C2orf71A6NGG8 1288 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 I3L4J1 428 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 M0QZ92 97 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 HNRNPCL1O60812 293 aaKnown RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 TOP3BO95985 862 aaKnown RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 EPHB2P29323 1055 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 TMPRSS15P98073 1019 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 OCRLQ01968 901 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 CRYMQ14894 314 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 CHI3L2Q15782 390 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 ATG16L1Q676U5 607 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 PACS1Q6VY07 963 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 CCDC91Q7Z6B0 441 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 LONP2Q86WA8 852 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 CCNJLQ8IV13 435 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 NUDCD3Q8IVD9 361 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 STKLD1Q8NE28 680 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 PGBD4Q96DM1 585 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 PGAP3Q96FM1 320 aaPredicted RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 PRR11Q96HE9 360 aaPredicted RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 TLE6Q9H808 572 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 FBXO6Q9NRD1 293 aaPredicted RBP14.97□□□□□ -0.01
TPM3-206ENST00000330188 ARL8BQ9NVJ2 186 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 SYBUQ9NX95 663 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 MCM8Q9UJA3 840 aa14.97□□□□□ -0.01
TPM3-206ENST00000330188 FAM237BA0A1B0GVD1 139 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 HHLA1C9JL84 531 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 BPGMP07738 259 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 C6orf222P0C671 652 aaPredicted RBP14.96□□□□□ -0.01
TPM3-206ENST00000330188 USP17L7P0C7H9 530 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 MYL2P10916 166 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 IFRD2Q12894 506 aaPredicted RBP14.96□□□□□ -0.01
TPM3-206ENST00000330188 ACCSLQ4AC99 568 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 BSPRYQ5W0U4 402 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 CST9Q5W186 159 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 DSTYKQ6XUX3 929 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 BHLHA9Q7RTU4 235 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 FAM13CQ8NE31 585 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 CDKL2Q92772 493 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 PTCD3Q96EY7 689 aaKnown RBP14.96□□□□□ -0.01
TPM3-206ENST00000330188 GORASP1Q9BQQ3 440 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 FBXW11Q9UKB1 542 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 CDH9Q9ULB4 789 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 PTCH2Q9Y6C5 1203 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 SCN10AQ9Y5Y9 1956 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 CCDC195A0A1B0GUA6 201 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 KCNK1O00180 336 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 BIRC5O15392 142 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 LTFP02788 710 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 NCAM1P13591 858 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 AKR1A1P14550 325 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.01
TPM3-206ENST00000330188 PTPN3P26045 913 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 NAB1Q13506 487 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 AGMOQ6ZNB7 445 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 PID1Q7Z2X4 250 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 RAB3IL1Q8TBN0 382 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 NAT9Q9BTE0 207 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 XPNPEP3Q9NQH7 507 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 RAD54BQ9Y620 910 aa14.96□□□□□ -0.01
TPM3-206ENST00000330188 COL4A4P53420 1690 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 SNNO75324 88 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 ANP32DO95626 131 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms