RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FIBCD1Q8N539 461 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ADCY4Q8NFM4 1077 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 EYA3Q99504 573 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 REEP2Q9BRK0 252 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 AVENQ9NQS1 362 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 POLHQ9Y253 713 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 C7orf72A4D263 438 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ARHGEF35A5YM69 484 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 SNPHO15079 494 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 CLDN3O15551 220 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ACSL4O60488 711 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 GH2P01242 217 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 EPHA3P29320 983 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 SLC26A2P50443 739 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 GTF2IP78347 998 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 GALK2Q01415 458 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 NFATC3Q12968 1075 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 CCDC28AQ8IWP9 274 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 CATSPER1Q8NEC5 780 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 FIG4Q92562 907 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 RILPQ96NA2 401 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 DOK1Q99704 481 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ZNF717Q9BY31 904 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 INTS2Q9H0H0 1204 aaKnown RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ZNF395Q9H8N7 513 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-201ENST00000328923 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 UGT2A1Q9Y4X1 527 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 IKBKGQ9Y6K9 419 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 UBE4BO95155 1302 aa12.16□□□□□ -0.46
SHMT2-201ENST00000328923 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PLOD2O00469 737 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 MED24O75448 989 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CDH1P12830 882 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 GAP43P17677 238 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 OPRL1P41146 370 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 AQP5P55064 265 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PMS2P3Q13401 168 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 MOXD1Q6UVY6 613 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PRR23BQ6ZRT6 265 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 TERB1Q8NA31 727 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SLC44A5Q8NCS7 719 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 TNIP2Q8NFZ5 429 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SGCDQ92629 289 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 COA7Q96BR5 231 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 MBOAT7Q96N66 472 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PKP2Q99959 881 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CFL2Q9Y281 166 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 GAKO14976 1311 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 FOCADQ5VW36 1801 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CYP3A7-CYP3A51PA0A087WV96 503 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 AURKAO14965 403 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SGTAO43765 313 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SNAP91O60641 907 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 FTLP02792 175 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 GSTM1P09488 218 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PTPN1P18031 435 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CYP3A7P24462 503 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 DCKP27707 260 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CENPCQ03188 943 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PPP4R4Q6NUP7 873 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 TRAF7Q6Q0C0 670 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 CARM1Q86X55 608 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 ASCC1Q8N9N2 400 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 TMEM79Q9BSE2 394 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 EMILIN2Q9BXX0 1053 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 ZC3H12CQ9C0D7 883 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SEPT11Q9NVA2 429 aaKnown RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 SEPT10Q9P0V9 454 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PSMC3IPQ9P2W1 217 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-201ENST00000328923 AP4S1Q9Y587 144 aa12.15□□□□□ -0.46
SHMT2-201ENST00000328923 PNMA6FA0A0J9YX94 578 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 TM9SF1O15321 606 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 KCNH1O95259 989 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 GZMAP12544 262 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms